| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2002 |
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| Symbol | |
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| ID | 6116265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2460856 |
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| End bp | 2462202 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641633505 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_001760381 |
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| Protein GI | 170726355 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.55227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.313368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACATTAC CTAATTTACC ATTTTGGAAA GAGTACCCAA CAAGAGACAG TGAGTGGGTT
CGCCAATACC CAACAAGACA TCACTCCATC AAAGAGGAAG AGGTATTTGG TAAACAACAG
ATGGGAATAT ACGTACACAT CCCATTTTGT AATCGGCTAT GTTTTAGCTG CCCATACATA
AAACATCAAA CCGATAAAAC GATAACCCGG CGCTATTTAG ATGCCCTAAA AACTGAAATA
TCAAATTACG CGGCGCGTCC ATACGTTCAA GATCATGAAA TTACACTTGG CTACATAGGT
GGAGGCACTC CCACTGCTCT CTCCTCTGCT GAGCTAGAAG AGCTGCTAGG TCACCTTCAC
TCTGAGCTCA ATATGAGTGA CGATGTAGAG CTATCCATAG AAACTACGCC AATAGATATA
ACAAAAAAGA AGGCTGAAAC TCTCTATAAC AATGGTGTCA AACGCATTAG CTTAGGTGTA
CAAACATTCG TCCAAGAGGA GCTAGAGAGT ATCGGTCGCC CTAGTGACCC AAAAATGTTG
GAAAATGCGA TCAAAATTTG TCAGGAAGCT GGTTTCACAA ATATAAACAT AGATCTGATG
CATGGATTAA ACGGTCAGAC AATGGAAAGC TGGGAATATA GCCTAGACAA GGCAATCGAA
TTAGGCGTGA CATGTGTTTC TTTTTACACC TATATGGAGT TTGCTCAGGT CAGTACAAAA
CGACGCAAAT TACCACCGGT GCCCACCACA GACGTTGTTG ATGAGATGTT TATGTTCGCG
GCCAAAAAGC TCACTGAAAA TGGATTTGAT GGTTACTTTG GGGATTGTTT TGCCAAACCA
GGCTACCAAC CAAGATATGG TGAACGCTCA TGGAGTGAAA ATATTCCCAT TATCCCGCTA
GGACCAACCG CAACAGGCCA TCTAAAAGAT CACTGGTACT TTAATGAACC CTCCATCAAT
AAATATATTG AGGTCGTCAA TTCAGGACAG CTCCCGATCT CAATGGGACA ATATATCAGC
AAAGAGGAAG CCATTCGCCG TGGAATGATT TTAGGTGTTA AGGCCTCAAA AGTTGATAGA
AAAATGTTCA AACATCTTTA TGGTGTTGAT TTTGTAGAAA AGTTCCAAAG TGAGATACAA
GATTTAGAAA GTAAAGGATT AGTCGAGTTG ACACAAAATG AACTCAAAGT CACCGATCCC
AAAGGCTGGT ACTACCTAGA CAACATCTCT AAGACATTTT ATTCCGAGTC GTTCAAAAGG
TACCCACAAC ATTTAGGTTC TGACATCACA GAGTTTCAAT CTAGCGTTGC GGAGTGGCAA
CCAATTGAAA TCACAACTCG ACCATAA
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| Protein sequence | MTLPNLPFWK EYPTRDSEWV RQYPTRHHSI KEEEVFGKQQ MGIYVHIPFC NRLCFSCPYI
KHQTDKTITR RYLDALKTEI SNYAARPYVQ DHEITLGYIG GGTPTALSSA ELEELLGHLH
SELNMSDDVE LSIETTPIDI TKKKAETLYN NGVKRISLGV QTFVQEELES IGRPSDPKML
ENAIKICQEA GFTNINIDLM HGLNGQTMES WEYSLDKAIE LGVTCVSFYT YMEFAQVSTK
RRKLPPVPTT DVVDEMFMFA AKKLTENGFD GYFGDCFAKP GYQPRYGERS WSENIPIIPL
GPTATGHLKD HWYFNEPSIN KYIEVVNSGQ LPISMGQYIS KEEAIRRGMI LGVKASKVDR
KMFKHLYGVD FVEKFQSEIQ DLESKGLVEL TQNELKVTDP KGWYYLDNIS KTFYSESFKR
YPQHLGSDIT EFQSSVAEWQ PIEITTRP
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