| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1991 |
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| Symbol | |
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| ID | 6116254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2448884 |
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| End bp | 2449501 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641633494 |
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| Product | ATP-dependent transcription regulator LuxR |
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| Protein accession | YP_001760370 |
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| Protein GI | 170726344 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.141856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00484475 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAAACAT TATTGTTATA TACATCTATT GAATGGAGAG GTGTTATTTT TTTGTGTGAT
AATTCATCAA TAGATGGTAT CTACTTAGGG GGAGGGGGAA TGGAGTCTTC TGTTTTAGGA
AACCTACTTC GAGAAGTTGA GATTGAATTA GCTTTAAAAA AAATGCATTC GGAAATTGAG
CATTATATTA AAGTTCATCA TAATGAAAAG GTTATATATA TAGCTGAGAG TCTTCTTTGT
GACTGTGTTA GAACCAGTAG CAATCATGAT ATGTACCCAG CTATTCAATA TGTTGTCATT
AATGAATTAT TGAAGGAGGT TTTACTCAAC AAGACCACCA GTGATGAACC TCAAAGTAAT
GAAGGAGAGT GTATATCTAC TATTGAATTA ACACAGAGGC AACATGAAAT TCTTCATTGG
GTCAAACTAG GAAAGAGCAA CTGGGAAATA TCAACTATTC TTTCTATCTC AATTGATACT
GTTAAGTTTC ATTTAAGAGG AATATACAAG CGATTAGGAG TTTCTAACCG TGTACAGGCG
GTACAAGTTG TCACAGCTTC TGATTTGGAT AGTTTAGACT TAGGAAGCTT AGTAAATATA
TTGAAAGCAA CCAACTGA
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| Protein sequence | MQTLLLYTSI EWRGVIFLCD NSSIDGIYLG GGGMESSVLG NLLREVEIEL ALKKMHSEIE
HYIKVHHNEK VIYIAESLLC DCVRTSSNHD MYPAIQYVVI NELLKEVLLN KTTSDEPQSN
EGECISTIEL TQRQHEILHW VKLGKSNWEI STILSISIDT VKFHLRGIYK RLGVSNRVQA
VQVVTASDLD SLDLGSLVNI LKATN
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