Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1979 |
Symbol | |
ID | 6116242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2437396 |
End bp | 2438031 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641633482 |
Product | uridine kinase |
Protein accession | YP_001760358 |
Protein GI | 170726332 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0572] Uridine kinase |
TIGRFAM ID | [TIGR00235] uridine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000633687 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00165825 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACTCTC AGTGTGTCAT TATCGGTATC GCGGGTGCAT CTGCATCAGG TAAAAGTTTA ATTGCAAAGA CGATATTCGA GGAGTTGTGC CGCGATCTTG GTACGGATCA AATTGGCGTT ATCGCTGAAG ATGCGTATTA CAGAGATCAG GGACATCTTT CAATGGAGCA GCGGGTGCTG ACCAACTACG ATCATCCAAA AGCGTTAGAT CATGAGTTGT TATGCCGTCA CCTGCAGGCA CTGAAAACTG GTGAGGCGGT AGAGATCCCG ACCTATAGCT ATAGCGATCA CACGCGTATG GCCGATACGA TTAAGATGAC GCCGAAGAAG GTGATCATCT TAGAGGGGAT TTTATTGCTG ACTGATCCTG GGTTAAGAGG ATTGATGGAT GCAAGCGTAT TTATGGATAC ACCATTGGAT ATCTGTTTTA TGCGCCGCTT AGCCCGCGAT GTTGCAGAAC GTGGACGTAC AATGGAGTCT GTGATGGCGC AATACACTGA AACGGTTCGT CCTATGTTCC TACAGTTTAT CGACCCCTCT AAGCAATATG CGGACATTAT TGTGCCTCGT GGAGGAAAGA ACCGCATCGC TACTGATATC CTTAAGGCGA GAATTCAACA TCTACTCGCA AAATAA
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Protein sequence | MNSQCVIIGI AGASASGKSL IAKTIFEELC RDLGTDQIGV IAEDAYYRDQ GHLSMEQRVL TNYDHPKALD HELLCRHLQA LKTGEAVEIP TYSYSDHTRM ADTIKMTPKK VIILEGILLL TDPGLRGLMD ASVFMDTPLD ICFMRRLARD VAERGRTMES VMAQYTETVR PMFLQFIDPS KQYADIIVPR GGKNRIATDI LKARIQHLLA K
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