Gene Swoo_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1979 
Symbol 
ID6116242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2437396 
End bp2438031 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content47% 
IMG OID641633482 
Producturidine kinase 
Protein accessionYP_001760358 
Protein GI170726332 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000633687 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00165825 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTCTC AGTGTGTCAT TATCGGTATC GCGGGTGCAT CTGCATCAGG TAAAAGTTTA 
ATTGCAAAGA CGATATTCGA GGAGTTGTGC CGCGATCTTG GTACGGATCA AATTGGCGTT
ATCGCTGAAG ATGCGTATTA CAGAGATCAG GGACATCTTT CAATGGAGCA GCGGGTGCTG
ACCAACTACG ATCATCCAAA AGCGTTAGAT CATGAGTTGT TATGCCGTCA CCTGCAGGCA
CTGAAAACTG GTGAGGCGGT AGAGATCCCG ACCTATAGCT ATAGCGATCA CACGCGTATG
GCCGATACGA TTAAGATGAC GCCGAAGAAG GTGATCATCT TAGAGGGGAT TTTATTGCTG
ACTGATCCTG GGTTAAGAGG ATTGATGGAT GCAAGCGTAT TTATGGATAC ACCATTGGAT
ATCTGTTTTA TGCGCCGCTT AGCCCGCGAT GTTGCAGAAC GTGGACGTAC AATGGAGTCT
GTGATGGCGC AATACACTGA AACGGTTCGT CCTATGTTCC TACAGTTTAT CGACCCCTCT
AAGCAATATG CGGACATTAT TGTGCCTCGT GGAGGAAAGA ACCGCATCGC TACTGATATC
CTTAAGGCGA GAATTCAACA TCTACTCGCA AAATAA
 
Protein sequence
MNSQCVIIGI AGASASGKSL IAKTIFEELC RDLGTDQIGV IAEDAYYRDQ GHLSMEQRVL 
TNYDHPKALD HELLCRHLQA LKTGEAVEIP TYSYSDHTRM ADTIKMTPKK VIILEGILLL
TDPGLRGLMD ASVFMDTPLD ICFMRRLARD VAERGRTMES VMAQYTETVR PMFLQFIDPS
KQYADIIVPR GGKNRIATDI LKARIQHLLA K