Gene Swoo_1974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1974 
Symbol 
ID6116237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2431450 
End bp2432823 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content47% 
IMG OID641633477 
Productputative chaperone 
Protein accessionYP_001760353 
Protein GI170726327 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000699043 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00684701 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTGTCG GTTTTGATTA TGGAAGTGCC AATTGCGCCG TTGGTGTTAT GCAAAACAGT 
GAGGTGAAAC TGTTGCCTCT GACTGAAAGT TCACACTATT TAACCTCAAC TCTCTATGCC
TTAGACAGAG AGTTGATTGC CGAAGCTGTG CATCAACAGA TGCCAGACTC CCTTAAAGCT
GAATATGCTA AAGCCCGTGC ATCTCAATTA ACCCGTGCTC GCAGTGCTCG CAGGGAGCTG
GATCTAGAGC CCAATGAGCA AGCTGTATTT GTGGGGGAGC AAGCGGTAAA AGCCTATTTA
GATATGCCCG AAGAGGGCTT TTATGTCCGT TCACCTAAAT CTTTTTTAGG GGCAACTGGC
TTGAGAGCGG ATCAAGTTGC GCTGTTTGAA GATATCGTCA CTATGATGAT GCTGCATATC
AAGCAAGAGG CCGAATCCAC TCGCGGTTTA AACGCTAAAG GCGCTATTAC TCATGCTGTT
ATTGGCCGTC CCGTTAACTT TCAGGGGATT GGTGGAGAGG AGAGTAACCT GCAGGCTGAA
TCAATACTAA GACTCGCCGC CAAACGTGCA GGCTTTGTTG ATGTGGACTT TTTGTTTGAG
CCATTAGCCG CAGGTATGGA TTACGAAGCA AGCCTTGATG AGGATAAGCT TGTGTTGGTG
GTTGATGTGG GCGGCGGTAC TACTGATTGC TCTGTGGTTA AGATGGGACC TTCTCATGTC
GATGCTAAGG ACAGAAGCCA AGACTTTCTT GGTCACAGCG GTCAACGCAT TGGAGGGAAC
GATCTTGATA TCGCACTATC GATGAAGGCA TTTATGTTAC ATCTAGGCTT AGGTTGCCAC
ATGGTGAATG GATTACCTGT CCCGAGTAAA CCTTTCTGGA ATGCTGTCGC GGTCAATGAT
ATCAGTGCGC AGCGTGACTT TTCATCACTT AACTCCCGAA AGACCATCGA GGAGCTGATT
AAAGATGCCA AGCGTCCAGA GTTGCTGCAG CGTTTGTTGA AGGTACAAAA AGATCAACTA
GGTTACCGCA TAGTTCGCAG TGCTGAGCAG GTTAAAATCA GTTTGTCAGA TGCCGACAGT
GTGACGGCTA ACTTAGATTA TGTTTGTCCG AATTTACATG CTGAAGTGAG CCAAGCCCTG
TTTAAAGAGG CGATTGAGCT ACCAAGCGCT AAAATTGAGG CCTTGATGAA GCAAGCATTA
GAGATCGCAG GGGTTAAGCC TGATGTTATC TATGTGACTG GTGGAACGGC GCGAAGTCCC
GCTATTTACG ATAAAATAGC CGCCATGTAT CCTGAAACTC CAATTGTTGT TGGGGATCAT
TTTGGTAGCG TAACAGCGGG CTTAACGCGC TGGGCTCAAA AGGTGTTTGC TTAG
 
Protein sequence
MFVGFDYGSA NCAVGVMQNS EVKLLPLTES SHYLTSTLYA LDRELIAEAV HQQMPDSLKA 
EYAKARASQL TRARSARREL DLEPNEQAVF VGEQAVKAYL DMPEEGFYVR SPKSFLGATG
LRADQVALFE DIVTMMMLHI KQEAESTRGL NAKGAITHAV IGRPVNFQGI GGEESNLQAE
SILRLAAKRA GFVDVDFLFE PLAAGMDYEA SLDEDKLVLV VDVGGGTTDC SVVKMGPSHV
DAKDRSQDFL GHSGQRIGGN DLDIALSMKA FMLHLGLGCH MVNGLPVPSK PFWNAVAVND
ISAQRDFSSL NSRKTIEELI KDAKRPELLQ RLLKVQKDQL GYRIVRSAEQ VKISLSDADS
VTANLDYVCP NLHAEVSQAL FKEAIELPSA KIEALMKQAL EIAGVKPDVI YVTGGTARSP
AIYDKIAAMY PETPIVVGDH FGSVTAGLTR WAQKVFA