Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1968 |
Symbol | |
ID | 6116231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2426066 |
End bp | 2426869 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641633471 |
Product | PhzF family phenazine biosynthesis protein |
Protein accession | YP_001760347 |
Protein GI | 170726321 |
COG category | [R] General function prediction only |
COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00736521 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0504926 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATAA AAATAGATAT TATTGATGCA TTTACTGATG TTAGGTTTAA AGGTAATTCT GCTGCAGTGA TTATTACTGA TACTTGGTTG CCTGATGAGT TAATGCAATC AATAGCGATT GAGAATAACT TGTCTGAAAC GGCTTTTGTG AAACGTTTAA ATACTCAGGA TTATCAAATT AGATGGTTTT CTCCTATTAC AGAGATAGAC TTCTGTGGAC ATGCGACATT AGCGGCCTCT TTTGTGATTT TTAAGGAACA TAAAGGGCTT GAGGAGATAA GGTTTACTGC AAAAGCAGTG GGGGAAGTTG TGATCACGAA ATCTTATGAC AGCTATATTC AGATGTCATT TCCTAATCGT ATGCCTCAAA AGCTTAAAAG TGTTCCCACA GCCTTAATAG AGGGACTATC GATAAAGCCC GTTGATGTAT TGCGTAATGA GCAAGCCTAT GTCGTGGTTT ATCGGGATAG TTGTGATGTT ATCTCTGTTG AGAAAGATGA TGAAATACTT AAACGACTGG CACCCTTTGA TGTTGTAGTG ACCGCAAAAG GCAATAATGT TGAGGGTGAG TACGATTTTA TCTCTCGTTA TTTCTGGCCT GCCAATGGAG GGGGTGAAGA CCCTGTAACG GGCTCAATTC ATACAGGGCT GGCGCCCTAC TGGTCAGCGC GTTTAGACAA AAATGAGCTA AAAGCTTATC AGGCCTCTGC TAGAGGAGGA GAGTTGCTAT GTCGTGTTGA TGGAGAGCGT GTCTATATTT CTGGGAAAGC AGTACAGTAC TTAGAGGGCG TTATTCATCT ATAG
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Protein sequence | MKIKIDIIDA FTDVRFKGNS AAVIITDTWL PDELMQSIAI ENNLSETAFV KRLNTQDYQI RWFSPITEID FCGHATLAAS FVIFKEHKGL EEIRFTAKAV GEVVITKSYD SYIQMSFPNR MPQKLKSVPT ALIEGLSIKP VDVLRNEQAY VVVYRDSCDV ISVEKDDEIL KRLAPFDVVV TAKGNNVEGE YDFISRYFWP ANGGGEDPVT GSIHTGLAPY WSARLDKNEL KAYQASARGG ELLCRVDGER VYISGKAVQY LEGVIHL
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