Gene Swoo_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1968 
Symbol 
ID6116231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2426066 
End bp2426869 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content41% 
IMG OID641633471 
ProductPhzF family phenazine biosynthesis protein 
Protein accessionYP_001760347 
Protein GI170726321 
COG category[R] General function prediction only 
COG ID[COG0384] Predicted epimerase, PhzC/PhzF homolog 
TIGRFAM ID[TIGR00654] phenazine biosynthesis protein PhzF family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00736521 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0504926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAA AAATAGATAT TATTGATGCA TTTACTGATG TTAGGTTTAA AGGTAATTCT 
GCTGCAGTGA TTATTACTGA TACTTGGTTG CCTGATGAGT TAATGCAATC AATAGCGATT
GAGAATAACT TGTCTGAAAC GGCTTTTGTG AAACGTTTAA ATACTCAGGA TTATCAAATT
AGATGGTTTT CTCCTATTAC AGAGATAGAC TTCTGTGGAC ATGCGACATT AGCGGCCTCT
TTTGTGATTT TTAAGGAACA TAAAGGGCTT GAGGAGATAA GGTTTACTGC AAAAGCAGTG
GGGGAAGTTG TGATCACGAA ATCTTATGAC AGCTATATTC AGATGTCATT TCCTAATCGT
ATGCCTCAAA AGCTTAAAAG TGTTCCCACA GCCTTAATAG AGGGACTATC GATAAAGCCC
GTTGATGTAT TGCGTAATGA GCAAGCCTAT GTCGTGGTTT ATCGGGATAG TTGTGATGTT
ATCTCTGTTG AGAAAGATGA TGAAATACTT AAACGACTGG CACCCTTTGA TGTTGTAGTG
ACCGCAAAAG GCAATAATGT TGAGGGTGAG TACGATTTTA TCTCTCGTTA TTTCTGGCCT
GCCAATGGAG GGGGTGAAGA CCCTGTAACG GGCTCAATTC ATACAGGGCT GGCGCCCTAC
TGGTCAGCGC GTTTAGACAA AAATGAGCTA AAAGCTTATC AGGCCTCTGC TAGAGGAGGA
GAGTTGCTAT GTCGTGTTGA TGGAGAGCGT GTCTATATTT CTGGGAAAGC AGTACAGTAC
TTAGAGGGCG TTATTCATCT ATAG
 
Protein sequence
MKIKIDIIDA FTDVRFKGNS AAVIITDTWL PDELMQSIAI ENNLSETAFV KRLNTQDYQI 
RWFSPITEID FCGHATLAAS FVIFKEHKGL EEIRFTAKAV GEVVITKSYD SYIQMSFPNR
MPQKLKSVPT ALIEGLSIKP VDVLRNEQAY VVVYRDSCDV ISVEKDDEIL KRLAPFDVVV
TAKGNNVEGE YDFISRYFWP ANGGGEDPVT GSIHTGLAPY WSARLDKNEL KAYQASARGG
ELLCRVDGER VYISGKAVQY LEGVIHL