| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1955 |
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| Symbol | |
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| ID | 6116218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2402771 |
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| End bp | 2404627 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633458 |
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| Product | acetolactate synthase 3 catalytic subunit |
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| Protein accession | YP_001760334 |
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| Protein GI | 170726308 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0672621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAACA TTACACCAGA TGCTAACCGA CATATCGAGA GTGAGGATCA CCGTCCAAAC
TCATTATATT CAAGCGATTA CCGTCGCTGT ATCGAGATAC TGCATACCGT AGCGGTAACT
TATGAGGGTT TACAAATGGA GAAGTTATCC GGCGCCAGTA TGATCGTCCG TTCACTTATC
GACGAAGGCG TAAAACATAT ATTCGGCTAT CCTGGCGGAT CCGTGTTAGA TATCTATGAT
GCCCTACACG AAAAATCCAA AATAGAACAT ATCTTAGTTC GTCATGAACA AGCTGCCGTG
CACATGGCTG ACGGCTATGC CCGCGCAACG GGTGAAGTCG GTGTGGTCCT TGTCACATCA
GGCCCCGGCG CCACCAACAC GATTACTGGT ATTGCAACCG CTTATATGGA TTCAATTCCT
CTGGTGATTG TCTCGGGTCA AGTTCCTAGC AATTTGATCG GTAACGATGC ATTCCAAGAG
TGTGACATGA TCGGTATCTC AAGGCCCGTT GTTAAACACA GCTTTTTGGT CACTGACGCA
CGAGATATCC CTGAGATCAT CAAAAAAGCC TTCTTTATCG CAGCCAGCGG CAGACCAGGC
CCTGTCGTTG TCGATGTTCC AAAAGATTGC ATGAACCCTG AGATACTCCA TGATTATGAG
TATCCAAATG ACATCAGCAT GCGTTCATAC AACCCAACGA CCTCTGGTCA CAAAGGGCAG
ATCCGCCGCG GAATACAGGC GCTCCTGGCA GCTAAAAAGC CAGTTCTTTA CGTCGGTGGC
GGCGCAGTTA TATCAGAGTG CGACAAGCAA ATTTTAGCCC TATCAGAAAA ACTAAATATT
CCTGTGGTTA GTACCTTAAT GGGGCTCGGT GCTTTTCCCG GAACACATCA AAATAGCTTA
GGCATGCTGG GCATGCACGG TTGCTATGAA GCCAACATGG CGATGCACAA TACCGATTTA
ATCTTCGGTA TTGGGGTGCG CTTTGATGAC AGAACCACCA ATAATGTCGA AAAATACTGC
CCCAACGCCA CCATTTTGCA TATAGATATA GACCCCTCCT CTATCTCTAA AACCATACGT
GTCGATATTC CTATCGTTGG TTCGGCAGAT AAAATTCTCG ATGTGATGTT AACTCAACTA
AATGCATCCA ATGATGACAA TCGAGATGAA GCTGCCATCG ATTTCTGGTG GAGTGAAATT
AATCAATGGC GTGAACGTAA GAGTCTTGCC TATGACAAAA CCAGTGAAAA AATTAAGCCA
CAAGAGGTGA TTGAAGCCCT GCATAAACTC ACCAAAGGTA ACGCTTATGT GGCTTCAGAT
GTAGGCCAGC ACCAGATGTT TGCCGCCCTC TATTATCCTT TTGATAAACC ACGCCGCTGG
ATAAACTCAG GCGGGCTCGG CACCATGGGA TTTGGCTTGC CAGCAGCCAT GGGGGTCAAG
TTAGCCAAGC CTGATGAAAC AGTGCTTTGT GTGACTGGTG ATGGTTCAAT ACAGATGAAT
ATTCAGGAGT TATCGACAGC GCTTCAATAC GATATTCCTG TAAAAATCAT TAATCTAAAT
AATCGTTTTC TTGGCATGGT AAAGCAGTGG CAGGATATGA TCTATTCTGG CCGTCACTCT
CACTCTTACA TGGACTCTGT ACCTAACTTT GCCAAAATTG CTGAAGCTTA TGGCCATGTG
GGGATCACAA TCAGTGACTC ATCAGAGCTT GAATCTGGAC TTGAGAAAGC CCTAGCGATG
AAGGATAAGT TGGTGTTTGT CGACATTAAT GTCGATCAGA CAGAGCACGT TTACCCAATG
CTTATTCGCG GCGGGGCAAT GAACGAGATG TGGCTAAGCA AAACGGAGAA AAGCTAA
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| Protein sequence | MVNITPDANR HIESEDHRPN SLYSSDYRRC IEILHTVAVT YEGLQMEKLS GASMIVRSLI
DEGVKHIFGY PGGSVLDIYD ALHEKSKIEH ILVRHEQAAV HMADGYARAT GEVGVVLVTS
GPGATNTITG IATAYMDSIP LVIVSGQVPS NLIGNDAFQE CDMIGISRPV VKHSFLVTDA
RDIPEIIKKA FFIAASGRPG PVVVDVPKDC MNPEILHDYE YPNDISMRSY NPTTSGHKGQ
IRRGIQALLA AKKPVLYVGG GAVISECDKQ ILALSEKLNI PVVSTLMGLG AFPGTHQNSL
GMLGMHGCYE ANMAMHNTDL IFGIGVRFDD RTTNNVEKYC PNATILHIDI DPSSISKTIR
VDIPIVGSAD KILDVMLTQL NASNDDNRDE AAIDFWWSEI NQWRERKSLA YDKTSEKIKP
QEVIEALHKL TKGNAYVASD VGQHQMFAAL YYPFDKPRRW INSGGLGTMG FGLPAAMGVK
LAKPDETVLC VTGDGSIQMN IQELSTALQY DIPVKIINLN NRFLGMVKQW QDMIYSGRHS
HSYMDSVPNF AKIAEAYGHV GITISDSSEL ESGLEKALAM KDKLVFVDIN VDQTEHVYPM
LIRGGAMNEM WLSKTEKS
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