Gene Swoo_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1948 
Symbol 
ID6116211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2395208 
End bp2395690 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content46% 
IMG OID641633451 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_001760327 
Protein GI170726301 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000374499 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0250693 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTA AGAACGATAT GGTAGTTCAG TTTAACTACA CATTACGTGA TGAACAGGGA 
GAAGTATTGG AGACAAATGA GGGGTTAGAT CCTATTGCAT ACCTTCATGG TCACGACAAT
ATGATGCCTG GTGTTGAAGA TGCCATTGCC GGTAAAACCG TTGGTGAGAA GTTCTCTGTT
ACCCTAGCGC CAGAAACCAC TTACGGTGTT CGTAACGAAG AAGCTATTCA GCGTGTTTCA
GTAAAGCATC TTCAAGGTGA GAAAGTGTGG AAGGCTGGAA TGCGCGCATT GATCAATACC
GATCAAGGTC AACGTCAGGT TACCATTATC AAAATGGGTA AGTTTATGGC GACCGTTGAT
GTGAATCACC CGCTGGCGGG TCGCGAGCTA ACTTTTGACC TTGAGATTAT CGACGCAAGA
GCTGCAAGTG ATGAAGAGAT CGCTCATGGT CATGCGCACG GTAAAGGTGG TCACCACCAC
TAG
 
Protein sequence
MSIKNDMVVQ FNYTLRDEQG EVLETNEGLD PIAYLHGHDN MMPGVEDAIA GKTVGEKFSV 
TLAPETTYGV RNEEAIQRVS VKHLQGEKVW KAGMRALINT DQGQRQVTII KMGKFMATVD
VNHPLAGREL TFDLEIIDAR AASDEEIAHG HAHGKGGHHH