| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1947 |
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| Symbol | |
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| ID | 6116210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2393914 |
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| End bp | 2395101 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633450 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001760326 |
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| Protein GI | 170726300 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B
[TIGR02283] lytic murein transglycosylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000327314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0135301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAAAA ATGTCCCTTT AGCATCTCTG CTACTGTTTT CGAGTTTGAG TACACCACTG
GCCTTTGCGA CTGATTTCCC CTCTTGTGTG GTTGAGCTGC AAAAAACGGC CAAGAGCCAA
GGTTTGTCGG CCGATACGAT TGAAAACACT TTAGGTAAGG TTAAATACGT GGCTCGGGTC
ATTGAGCTAG ATAAAAAGCA GCCAGAGTTT AGTCAGACTT TCGATAACTA CTTCAGTAAG
CGAGTCACAG ATTGGCGTGT GAAAGAGGGG AGGCGTTTAC TCGCTGAGAA TCGTGAGCTT
CTTAATCAAC TGAAAGATAA ATATGGTGTT CCTCCACAAT ATTTAATGGC CTTTTGGGGC
TTAGAGACAA ATTTCGGCTC CTATAAGGGA AAGATGCCTG TTTTAGACTC TTTAGCGACG
TTAGCTTGTG ATCCTAGAAG AAGTGGATAC TTTACCGGTG AGTTGATGAA AGCCCTTAAA
CTCAAAGAGG AGTATCAATT TGAGGCAAGT GAGATGGTGG GCTCATGGGC GGGAGCCATG
GGGCACACTC AGTTCATGCC CTCTGCATAT ACAGCTTATG CGGTAGACGG CGATGGTGAT
GGTAAAGCTG ATCTATGGAA TAGTAGGGCT GATGCGTTAA CCTCTGCGGC AAACTTTCTG
CAGCAACTTG GCTGGCAGCG AAATGAGCGT TGGGGACGTG AAGTTACCCT ACCTGATAAC
TTCAGTTATG AGTATTTAGG TAAGCGCCAT GAACAAGCTT TAGTAAAATG GGCTGAGCTA
GGCGTGATGA AAAATGATGG TAAGCCTATC TCGACACCGG ACATGAAAGC TGCACTTTAC
TTACCTGCTG GTCATACAGG TCCTGCTTTT TTGGGCTATA AAAACTTCGA TGTGATTATG
CGCTGGAACC GTTCGACTTT CTATGTGATT GCCGTCGGTC ACCTTGCTGA TCGTATCAAT
GGTGGCGTTA GCCTAACAGT GGCGCCGCCT AAACAAGATA ACTTAAGCCG AGCACGGGTT
AAGCAACTTC AAGCAAAGTT AAATGAAAAA GGGTTCGATG TTGGTAAACC TGATGGTGTA
TTAGGGGCGA ACTCCAAATC AGGGCTGCGA GAATTCCAGC GTTCTGCAGG CTTAGTTGCC
GATGGCTTTC CAAGTGAGGC AAGTTTTAAT GCACTAGGCG TTCAATAG
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| Protein sequence | MIKNVPLASL LLFSSLSTPL AFATDFPSCV VELQKTAKSQ GLSADTIENT LGKVKYVARV
IELDKKQPEF SQTFDNYFSK RVTDWRVKEG RRLLAENREL LNQLKDKYGV PPQYLMAFWG
LETNFGSYKG KMPVLDSLAT LACDPRRSGY FTGELMKALK LKEEYQFEAS EMVGSWAGAM
GHTQFMPSAY TAYAVDGDGD GKADLWNSRA DALTSAANFL QQLGWQRNER WGREVTLPDN
FSYEYLGKRH EQALVKWAEL GVMKNDGKPI STPDMKAALY LPAGHTGPAF LGYKNFDVIM
RWNRSTFYVI AVGHLADRIN GGVSLTVAPP KQDNLSRARV KQLQAKLNEK GFDVGKPDGV
LGANSKSGLR EFQRSAGLVA DGFPSEASFN ALGVQ
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