Gene Swoo_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1945 
Symbol 
ID6116208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2392599 
End bp2393267 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content42% 
IMG OID641633448 
Producthypothetical protein 
Protein accessionYP_001760324 
Protein GI170726298 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000111939 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0117587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTAA CTATCCCCCT AATCGATATC CCCTTCGAGC TTCGTCATAC CTGCTGGTTT 
TGTGCTGAGC CATGTAACGA CTCTTTTCAG TATCATGCTA ATAGTCATAC ACCGCACCCA
AGTTTGGCTG TTCCAGCCTG TAAAGAGTGC TTAAAATTAG CTGAAAAGCA TAAGCTAACC
TCTATCTGGG AGTGTCAGAT AGCCGTAAAA GATGAGTTAA TGCGGATCTA TGCTAAGCAC
CTTGCCATTG GGATTAATTG GACAGAGCAG GAGTTAATTG ACTCTGAATT TTCCTGCAAG
GTATTTGAGG GCTTTAAAAA AAGTGGTTGG ATGATGTACC TTATCGCCAG AGATAGAGTT
AACGCCCATA GCTGGTCTAT CTCAATTGAT GGTGTACCTC TTGATATCGA AGAGAGGGAA
ACAAGTTTTG ATTTCGATGG TGTAAAATAC TCTTCCCTTT CAAAAGCCAT TAAACATTAC
AGCGAAACCT TAGGGCTAGA TAAACATTTT CTTCAAGCAA TCGTCTCACA AGTGGGCCGA
AATCGATTCG CTTATGCGGT TAGACTCTGC AGGATCAATA TCGCTTCAAA TAAGAGAACT
AAACAGGAGG TATTGAAAGA CCTAGCCCTT GAACAGGGTG AAGAGTTGAG TGACTCAACT
TGGTTTTAA
 
Protein sequence
MTLTIPLIDI PFELRHTCWF CAEPCNDSFQ YHANSHTPHP SLAVPACKEC LKLAEKHKLT 
SIWECQIAVK DELMRIYAKH LAIGINWTEQ ELIDSEFSCK VFEGFKKSGW MMYLIARDRV
NAHSWSISID GVPLDIEERE TSFDFDGVKY SSLSKAIKHY SETLGLDKHF LQAIVSQVGR
NRFAYAVRLC RINIASNKRT KQEVLKDLAL EQGEELSDST WF