Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1945 |
Symbol | |
ID | 6116208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2392599 |
End bp | 2393267 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641633448 |
Product | hypothetical protein |
Protein accession | YP_001760324 |
Protein GI | 170726298 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000111939 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0117587 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTAA CTATCCCCCT AATCGATATC CCCTTCGAGC TTCGTCATAC CTGCTGGTTT TGTGCTGAGC CATGTAACGA CTCTTTTCAG TATCATGCTA ATAGTCATAC ACCGCACCCA AGTTTGGCTG TTCCAGCCTG TAAAGAGTGC TTAAAATTAG CTGAAAAGCA TAAGCTAACC TCTATCTGGG AGTGTCAGAT AGCCGTAAAA GATGAGTTAA TGCGGATCTA TGCTAAGCAC CTTGCCATTG GGATTAATTG GACAGAGCAG GAGTTAATTG ACTCTGAATT TTCCTGCAAG GTATTTGAGG GCTTTAAAAA AAGTGGTTGG ATGATGTACC TTATCGCCAG AGATAGAGTT AACGCCCATA GCTGGTCTAT CTCAATTGAT GGTGTACCTC TTGATATCGA AGAGAGGGAA ACAAGTTTTG ATTTCGATGG TGTAAAATAC TCTTCCCTTT CAAAAGCCAT TAAACATTAC AGCGAAACCT TAGGGCTAGA TAAACATTTT CTTCAAGCAA TCGTCTCACA AGTGGGCCGA AATCGATTCG CTTATGCGGT TAGACTCTGC AGGATCAATA TCGCTTCAAA TAAGAGAACT AAACAGGAGG TATTGAAAGA CCTAGCCCTT GAACAGGGTG AAGAGTTGAG TGACTCAACT TGGTTTTAA
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Protein sequence | MTLTIPLIDI PFELRHTCWF CAEPCNDSFQ YHANSHTPHP SLAVPACKEC LKLAEKHKLT SIWECQIAVK DELMRIYAKH LAIGINWTEQ ELIDSEFSCK VFEGFKKSGW MMYLIARDRV NAHSWSISID GVPLDIEERE TSFDFDGVKY SSLSKAIKHY SETLGLDKHF LQAIVSQVGR NRFAYAVRLC RINIASNKRT KQEVLKDLAL EQGEELSDST WF
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