Gene Swoo_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1944 
Symbol 
ID6116207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2391585 
End bp2392529 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content40% 
IMG OID641633447 
Productresponse regulator receiver modulated CheW protein 
Protein accessionYP_001760323 
Protein GI170726297 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000211383 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0128896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAG TACTAGATTC AGTAGACCAA CGTACCCAAT TAGTCGGTGA AAACCGCTTA 
GAACTTTTAT TATTTCGAAT TAATGCAACT CAACTATTTG CCATCAATGT TTTTAAAGTC
AAAGAGGTAG TTAAACTTCC TCCGTTAAAC TCTGTGCCTG GAAGTCACCC GCATATCTCA
GGTGTTGCGA ATATTCGCGG CTCTTCAATT CCGGTGATTG ATCTTAGAGG TGCTATCGGC
TTCTCACCCA TGAGTAGTGA TCAAGAGCGT AATCTGATTA TTACTGAATA CAACCGTAGT
ATTCAGGGCT TTATGGTGGG TAAGGTTGAA CATATCGTTA ATATGACCTG GAGTGATATT
TTACCTCCGC CTAAAACTGC AGGTAAGCAA AATTATCTTA CAGCTATCTG TCGATTAGAG
ATCGATGATG TGATCAACAT GGTGTCAATT ATCGATGTTG AAAAGGTGCT AGCGGAGATC
ATCAATTACG ATATTCGCCT TTCAGAAGGT GTGTTAGATG AAGAGTTAGC CAAAGAGATG
GTTGGTCGTA GAATATTAAT TGCTGATGAT TCATCAACAG CTCGAAGACA GATTAAAGAG
ACGCTTGAGC CACTAGGAAT TGAGATTTTA GAGGTGTCTG ATGGCTTGCA AGCCCTCCAG
TTACTACAAA GTTGGTGTAA CGAAGGTAAA TCGATCTACG ATGAGATATT AATGCTTATC
ACAGATGCTG AGATGCCTGA GATGGATGGA TATAAACTAA CCTCAGAGAT ACGAAGTGAC
AATCGTATGT CGGATCTGTT TATTGCATTG AACACCTCAT TAAGTGGCAG TTTTAATGAA
GCCATGGTCG AGAAGGTTGG TTGTGATCGA TTTATTTCTA AGTTTCAACC GGATCTCTTA
GTTGGTGTCG TACAAGATAA ATTGAGAGAG CAGAAAGAGA AGTAA
 
Protein sequence
MTKVLDSVDQ RTQLVGENRL ELLLFRINAT QLFAINVFKV KEVVKLPPLN SVPGSHPHIS 
GVANIRGSSI PVIDLRGAIG FSPMSSDQER NLIITEYNRS IQGFMVGKVE HIVNMTWSDI
LPPPKTAGKQ NYLTAICRLE IDDVINMVSI IDVEKVLAEI INYDIRLSEG VLDEELAKEM
VGRRILIADD SSTARRQIKE TLEPLGIEIL EVSDGLQALQ LLQSWCNEGK SIYDEILMLI
TDAEMPEMDG YKLTSEIRSD NRMSDLFIAL NTSLSGSFNE AMVEKVGCDR FISKFQPDLL
VGVVQDKLRE QKEK