| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1938 |
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| Symbol | |
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| ID | 6116201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2385204 |
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| End bp | 2385794 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633441 |
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| Product | carboxymuconolactone decarboxylase |
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| Protein accession | YP_001760317 |
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| Protein GI | 170726291 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0420591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0162629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCACTCG TTACCCCCCT TCTCGAATCC AACGAAGAAG TTGCCCAGCT TGCTAGATTT
TTTAATGAAA CATTAGGCTT TTGCCCTAAT AGCGTACTGA CCATGATGAG AAGGCCTAAA
ATAGCTAAAG CCTTTATCGA GCTTAATATG GCTGTAATGG ACAATCAGGG GAGAGTGACA
AGTTTACTCA AGCGACTAAT CGCTTATGTT TCCAGTAATG TTACTGGTTG TCGCTATTGC
CAAGCACATA CTATTAGAGC CGCTGAGCGC TATGGCGCAG AGCAAGCTCA ACTTGATAAT
ATATGGGAAT ATAAAACACA CCCTGCATTT ACTGATGCAG AGCGCGCCGC ATTGGATTTC
TCAGTAGCAG CATCAACAGT CCCTAACGGT GTTGATGAGG AACTGAATCA ACGTCTACAT
CAATACTGGG AAGAGGATGA GATTGTAGAA ATACTTGGGG TGATCTCGCT GTTTGGTTAC
CTTAATCGCT GGAATGACTC CATGGCCACC ACACTAGAAG AGGGAGCTAT CGCTTCAGGA
GAGAGCTTAC TTGCGTTAAA AGGCTGGGAA GTAGGCAAAC ATACAAACTA G
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| Protein sequence | MPLVTPLLES NEEVAQLARF FNETLGFCPN SVLTMMRRPK IAKAFIELNM AVMDNQGRVT
SLLKRLIAYV SSNVTGCRYC QAHTIRAAER YGAEQAQLDN IWEYKTHPAF TDAERAALDF
SVAASTVPNG VDEELNQRLH QYWEEDEIVE ILGVISLFGY LNRWNDSMAT TLEEGAIASG
ESLLALKGWE VGKHTN
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