| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1937 |
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| Symbol | |
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| ID | 6116200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2384399 |
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| End bp | 2385124 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633440 |
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| Product | ABC transporter |
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| Protein accession | YP_001760316 |
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| Protein GI | 170726290 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.579626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.017487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGGAATAT TGGCAAGTCT TCTTGCGCCT AAAGTAAATG CCGAAACTTT GCATCTCACT
TCACTTCATT GGCCACCCTA TTCGAGTAGT CAGCTAGCTG AGCAGGGAGC GGTGATTGCC
ATCACTCGAG CGGCTGTGAA TGCCATGGGT CATAAACTAG AAGTTGATTT CTACCCCTGG
AGCCGAGCTG TCAGATTAGT GAATAGAAAG GGGGCAAAAT ATGACGGTTA CCTTCCAGCC
TATCCTTATC CTACCGAGAA ATTTGTTTTT TCAGATGTTC TAGGCACTAG CCCGTTGGGA
TTAGTCGAGC GACGAATACA CCCTGTGAGC TGGTTAGAAG CCTCAGATCT TAATCAATAT
ACTTTAGGTG TAGTGAGAGA CTATGTGAAC ACCAGTGAGC TTGATGCCAT GATCAAACTG
GGAACTCAAA AGGTTGAGGT GGTGAATTCT GACGAACACA ATTTGACAAA AGTGGCAACG
GCGCGAGTGG ATGCAGCTGT TATGGATGTT AATGTGTTGC AGTTTTTACT GCTACAGAGC
AAGTTAAAAC CATTGAGTAG TAAAGTACAA GTCAATAAAC ATATCTTAGA AAACAAAGAT
TTGACTATTG CATTTGCGAA TAACTCACAA GGGCTTTTTT GGCGAGATAT TGTTAATGCA
GGCCTGGCTA AAATTGACAG TGATGCAATG CTTTCAGCTT ATATAAAAAA CAGTGAAAAA
AAGTAG
|
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| Protein sequence | MGILASLLAP KVNAETLHLT SLHWPPYSSS QLAEQGAVIA ITRAAVNAMG HKLEVDFYPW
SRAVRLVNRK GAKYDGYLPA YPYPTEKFVF SDVLGTSPLG LVERRIHPVS WLEASDLNQY
TLGVVRDYVN TSELDAMIKL GTQKVEVVNS DEHNLTKVAT ARVDAAVMDV NVLQFLLLQS
KLKPLSSKVQ VNKHILENKD LTIAFANNSQ GLFWRDIVNA GLAKIDSDAM LSAYIKNSEK
K
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