| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1933 |
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| Symbol | |
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| ID | 6116196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2380998 |
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| End bp | 2381903 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633436 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001760312 |
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| Protein GI | 170726286 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0399555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGATAG ATGTCGACAC ATTCAAAGTG CTTGAGATAT TAGTCGAGGA GGGAAGCTTC
GCTAAGGCCG CAGAGCGTTT ACATAAGGCT CAGTCTGCGG TGAGTTATCA AGTTAAAAAA
CTTGAACATC ACTTAGGTGT AAAGCTTTTT TGTCGGGATC AGTACCGTGC TGAATTAACA
CCTGAGGGTA GGGTTATCCT TGCTGAAGGG CAAAAATTGT TGCAATACCT TGCCAACATT
GAACATTTAG CCAGCAAGTT CAGTGATGGG TGGGAGCCAA AACTTGAGCT CATTGTCGAT
GGATCTTTGC CGATGGAGCC CATTATGAAG GCATTGAAAC GGATGACGTT GGAAAATATC
CCCACAAAAA TCCAGTTGAA TGTGGAGTTT TTGGCTGGTG TTCAGGCAAG GTTCGAGCGC
GATCAAGCTG ATTTGATGTT AGTGAAAGAC TACAGAACTG GCCCTCATTA CCGTCCACAA
TCCCTTCCAG ATATCACAAC CATTTTGGTT GTTTCATCAA GCCACCCATT GGCGAACACT
CATGATGTTT CACTGCTTGA GTTACAAAGC CATGTTGAGT TGACCATAGA AGATTCTTCA
TCCGATATTC ATTATCACGA TGAGTTGCAG TTTGGCGGTG ATAAAGTGTT TTATCTTTCG
GGCTTTATCA TGAAGAAAAA TGCGTTGGAA ATGGGGCTTG GCTTTGGGTG GATGCCAGAT
TTTCTTATTC ATCAGGAGTT GGCAAGTGGC GAGATGGTTG AAGTCGACTT TACTGGGGGA
AGTCGGTATA CCTTCACACC TAAGCTGGTG TCGACAATGG AGCGCCCTCT GGGAAAGGCT
GGACAACTAT TTACTGAGTT CATTCTTGAT GAGTTTGCTA AAGCTGAACT CTCATACTCG
CTTTAG
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| Protein sequence | MRIDVDTFKV LEILVEEGSF AKAAERLHKA QSAVSYQVKK LEHHLGVKLF CRDQYRAELT
PEGRVILAEG QKLLQYLANI EHLASKFSDG WEPKLELIVD GSLPMEPIMK ALKRMTLENI
PTKIQLNVEF LAGVQARFER DQADLMLVKD YRTGPHYRPQ SLPDITTILV VSSSHPLANT
HDVSLLELQS HVELTIEDSS SDIHYHDELQ FGGDKVFYLS GFIMKKNALE MGLGFGWMPD
FLIHQELASG EMVEVDFTGG SRYTFTPKLV STMERPLGKA GQLFTEFILD EFAKAELSYS
L
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