| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1932 |
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| Symbol | |
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| ID | 6116195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2379660 |
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| End bp | 2380700 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641633435 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_001760311 |
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| Protein GI | 170726285 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0829932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGCG AACAAAATCC ACTGGGATTA CTGGGTATCG AATTTACAGA ATTTGCTACA
CCAGAACATG ACTTCATGCA TCAGGTTTTT ATCGATTTTG GTTTTTCAAA ACTAAAAAAG
AGCAAAACAA AGGACATTGC CTACTACAAA CAAAATGATA TTAATTTCCT CTTAAACAAC
GAACGTAGTG GATTTTCTTC AGAGTTTGCT AAAAGCCACG GACCAGCCAT CTGCTCAATG
GGCTGGCGTG TAGAGGATGC TAAGTTTGCT TTCGAAGGCG CAGTTGAGCG TGGTGCTAAG
CCTGCAGATG AAGCGAGTAA GGATCATCCT TACCCTGCCA TCTACGGTAT TGGCGACAGC
CTTATCTACT TTATCGATAT CTTTGGTGAA GAGAATAATA TCTACAAGCA TGATTTCGTC
GATCTAGAAA ACCCAGTTGT GACCCAAGAG AAAGGGTTTA TTGAAGTCGA TCACTTAACC
AATAATGTCT ACAAGGGCAC GATGGAGAAG TGGGCAAACT TCTATAAAGA TATTTTTGGT
TTTACTGAGG TGCGTTACTT TGACATCAAA GGTTCTCAAA CAGCACTGGT TTCCTATGCA
CTGCGCTCGC CAGATGGCAG CTTCTGTATT CCAATCAATG AAGGTAAAGG CAATGACAAA
AACCAAATTG ATGAGTACCT AAGAGACTAT GATGGCCCAG GTGTTCAGCA TTTAGCATTT
AGAAGTCGCG ATATTGTCGC CTCACTTGAT GCGATGGAAG GTTCATCAAT TCAGACACTA
GATATTATCC CTGAATATTA TGAAACTATC TTTGACAAGC TTCCTCAGGT CACTGAAGAC
AGAGAGCGCA TCAAGCACCA CCAGATTTTG GTTGATGGTG ATGAAGATGG ATATCTTTTG
CAGATCTTCA CTAAGAACCT ATTTGGTCCT ATATTTATTG AGATCATACA ACGTAAAAAT
AACCTAGGGT TTGGTGAAGG TAACTTTACC GCACTATTCC AATCAATTGA GCGCGATCAA
CAGCGCCGTG GTGTACTATA A
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| Protein sequence | MASEQNPLGL LGIEFTEFAT PEHDFMHQVF IDFGFSKLKK SKTKDIAYYK QNDINFLLNN
ERSGFSSEFA KSHGPAICSM GWRVEDAKFA FEGAVERGAK PADEASKDHP YPAIYGIGDS
LIYFIDIFGE ENNIYKHDFV DLENPVVTQE KGFIEVDHLT NNVYKGTMEK WANFYKDIFG
FTEVRYFDIK GSQTALVSYA LRSPDGSFCI PINEGKGNDK NQIDEYLRDY DGPGVQHLAF
RSRDIVASLD AMEGSSIQTL DIIPEYYETI FDKLPQVTED RERIKHHQIL VDGDEDGYLL
QIFTKNLFGP IFIEIIQRKN NLGFGEGNFT ALFQSIERDQ QRRGVL
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