| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1928 |
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| Symbol | |
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| ID | 6116191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2374134 |
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| End bp | 2375660 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633431 |
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| Product | hypothetical protein |
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| Protein accession | YP_001760307 |
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| Protein GI | 170726281 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01887] dipeptidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000792391 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.162614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC TTATTGGAAC CTTGAGTTTA CTCCTTGGTG TGATGCTGGC TTTCTCTGTG
CAGGCTTTAA GTCCTAAATC GGAGAGTGTG GCTGATTATG CTGTCGAAAA CTATGAAGAT
GCGATGTTAG ATTCTCTGGC TAAACTGGTG ACATTTAAGA CTGTTGCGAA GGAGGGGATG
ACACCCGAAA ATAATCCTGA GTTTATCGGT TTTAAGCAAG AGATAAAGAA ATTAACTCAA
GAGCTAGGTT TGACTTATTC AGATCATGGT TATGTGTTGT TAATCGGCTT AGGCGATAGT
GAGGATAAAC TAGGGGTTAT TACCCATGGT GATGTGCAGC CTGCAGATCC GGCGTTGTGG
GCTCAAGATC CTTTTTTGTT AGATACTCAA TCTCAGCCAG GTAAGTTAAT TGGTCGCGGC
ACTGAAGATG ATAAAGGCGC CATTGTCACC GCCATGTATG CCATGAAATC GATTAAAGAT
AAGCAACTTA CATTAAGTAA GCGTATTGAG TTGATGGTCT ACTTGGCTGA GGAATCTGAC
TGGGATCCTC TCAGGGAATT TCTTAAAGGC TATACCCCAG CTGAGATTAA TATCACGATT
GATGCCGAGT ACCCTGTGGT TACCGCTGAA AAGGGGTGGA GTCAAATTAC CTTCACGATT
CCTAATCTTG ATGGCGAGTT AATAGGTAAG TCCCATGATA AGCACTCTGC TAATTTACTT
TCATTTTCAG GTGGGTACTT CTCAAGTCAG ATCCCTCAAC AAGCAAAAGC GAGTTTATCT
AATGTTTCAT CCCCTTTATT GGCCAAACTT AAAACCATTG TAACCAAGCA GGAGGGGATG
GCTTATCGTT TTGAGTCCAA GGGGGAGCAT TTAACTATTT TTGCTGACGG TAAAGCAGCG
CACTCCTCTT CGCCAAAAGA TGGGGTGAAT GCGGTAACGC ATTTAGCCCA ACTTCTGTCA
GCACATCACT GGCCTAAGTC TCAGGCTTCA TTAACGCAAA GCTTCATTCA CGAGTTAATT
GGTTTGGGAG TTGAGGCTGA ACTGTTTGGG GATATCGCCT ATAACGATGG ATTTATGGGT
CCTATGACAT TGGCGCCAAC GGTGGTGAAG CAAACACAAA AGGGCACTGA GGTGACGCTA
AATTTACGCC GTCCTGTGGG GAAAACTCCC GAGCTTTTGG ATATTCAAAC TGCACAGGCA
CTCGAGCTTT GGCAGGTTAA GCATGATATC AAGTTAAAAG ATGTAGAAAC TTATTGGGGT
AAGCCTATGG TGATGGGAAA CGCGCCTCAT CTGGATACTC TGCTGGCTGT TTTCTCACAC
TTCACAGGGA TTAAAGATCC TAAGCCTGTT TCTATTGGGG GCTCAACCAA CAGTAAGCTC
TTTCCTAATG CGTTAAGTTT TGGTCCCACC ATGCCAGGTA AGGCATATAC GGGACACACG
GAGAATGAGT TTATGACTCA GAAGCAGTTT ATGTTGAATT TAAAGATGTA TACCGCGGCG
TTTATTGAGT TAGCGGTTGA GAAGTAA
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| Protein sequence | MKTLIGTLSL LLGVMLAFSV QALSPKSESV ADYAVENYED AMLDSLAKLV TFKTVAKEGM
TPENNPEFIG FKQEIKKLTQ ELGLTYSDHG YVLLIGLGDS EDKLGVITHG DVQPADPALW
AQDPFLLDTQ SQPGKLIGRG TEDDKGAIVT AMYAMKSIKD KQLTLSKRIE LMVYLAEESD
WDPLREFLKG YTPAEINITI DAEYPVVTAE KGWSQITFTI PNLDGELIGK SHDKHSANLL
SFSGGYFSSQ IPQQAKASLS NVSSPLLAKL KTIVTKQEGM AYRFESKGEH LTIFADGKAA
HSSSPKDGVN AVTHLAQLLS AHHWPKSQAS LTQSFIHELI GLGVEAELFG DIAYNDGFMG
PMTLAPTVVK QTQKGTEVTL NLRRPVGKTP ELLDIQTAQA LELWQVKHDI KLKDVETYWG
KPMVMGNAPH LDTLLAVFSH FTGIKDPKPV SIGGSTNSKL FPNALSFGPT MPGKAYTGHT
ENEFMTQKQF MLNLKMYTAA FIELAVEK
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