Gene Swoo_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1925 
Symbol 
ID6116188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2368800 
End bp2369069 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content40% 
IMG OID641633428 
Producthypothetical protein 
Protein accessionYP_001760304 
Protein GI170726278 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00538746 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAATAGAA TTAAAGAAGC TCAAGAGCAC CTAAAGAATG AGTTTAAACT TTATAATGAC 
GCTAGCAGTA AAAAGCTTCC GGATCTCGAG CTTGAATCCC CCGAAAAGCT TGAAGCACTA
TTAGAGTCTG TCACGCGAAG AGAGTCATTA AGTCGTGATA AAAAAACGCC TCCCGCAACT
AAGCTCAAAT CCGCCTTAGC CGACAACCTT CTTCTACTGG ATAATTTTGA TATTAAGAAA
GCCAAAGAAG CAGGAAAAGC TGAAAGTTAG
 
Protein sequence
MNRIKEAQEH LKNEFKLYND ASSKKLPDLE LESPEKLEAL LESVTRRESL SRDKKTPPAT 
KLKSALADNL LLLDNFDIKK AKEAGKAES