| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1911 |
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| Symbol | |
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| ID | 6116174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2353229 |
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| End bp | 2356051 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633414 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_001760290 |
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| Protein GI | 170726264 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000962851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACCA AAGCAAGCTT GCTTGCCTTG GCGATAGGTG GTGTGTCCAC GTTCGCCCAA
GCAGCAGACA ATCTGATCAT CTCTGAGTAT GTCGAAGGCA GCAGCAACAA TAAAGCGTTC
GAGCTCTACA ATCCAACCAC CGCAGCGCTA GATCTTAGCC AATATGAAGT TAAATTCTAC
TTTAACGGTA ATACACAAGC AGGTACAACA ATCAGCTTAA GTGGCTCATT GGCACCTGGA
GAGGTGTATG TGGTCGCTGA TAATGATTCA AGTGCTGATA TCTTAGCCAT TGCCGATCAA
GTCAGTAATA GCAGTTTTTA CAATGGCGAT GATGCACTGG TACTCATGTC AGGTGGCGTC
GTTATCGATA GTTTAGGTCA GGTTGGTTTT GATCCTGGTA GTCAGTGGGG AAGTGGAGAT
CTCTCTACCC AGAATAATAC ACTTAGACGT AATCCAGATA TGTTGATCGC AGATACTGTG
GTTGATGATG AAGCGAGCTT AAATACTTGG TTAGGTTTTG CTCAGGATGA TATCTCTGAT
CTGGGGATGT TTGACGGTTC AGGTCCAATT GATCCGCCTC CACCAGTAGA TCTTGTGTGC
CACGATCCTT TTGTGACAAT CCATGTACTG CAGGGCCAAA CTGATGTGAG CCCATACAAT
GGCCAAACTG TTGAAGTTGA AGCGGTTGTA ACCAGTAATC AAGAGGCAGG GCTTAAAGGA
CTCTTTATCC AGATGCCTGA TGATGCAGTT GATGCCGACC CACTGACCTC AGAAGGTGTC
TTTGTTTATA CTGGTGGAGA TACTGGTTAC CTAGCTGGCG ATCTTGTTCG CATGCAAGCT
GTGGTTAAAG AGTTTAATGG ACTCACTGAA CTGACCGATC TTGTATCTCA TACATTGTGT
GCTTCTGCTC AGGCAATCCC AAGCCCAGCA AGTGTGACAC TTCCAGTTGC TGATATCGCA
GATCTTGAAG CGTTTGAAGG GATGCGAGTG AGCTTCACTC ATAATTTAGT CGTTAACGAA
GTGTATAACT TAGGCCGTTA TGGTGAACTA TTGCTTGGAA GTGAGCGTCA CTTTATCGGT
ACGCAAGTTG CTGCTCCAGG CGCCGATGCC TTGGCTGTTA CTGCTGCGAA TGCAAGGGAT
GCTATTGTAC TTGATGACGG CTTAACGGCT CAAAACCCAG ATCCGGTTCG TTACCCTTCA
CCAGGCTTAA GTGCCGATAA CACTGTTCGT GTTGGTGATA CAGTTACCGG ATTAAATGCC
ATGATGCACT ATGCATTTGG TAAGTACCGT TTGATGCCTG TTGATACAGT CAATTTCATT
GCTGAAAACG CAAGAACGCT TGCACCTGAA CTTGCTGCGG GTGGTAATCT AACCGTGGCA
AGTTTTAACG TTCTTAACTA CTTCAACGGT GACGGTGCTG GTGGCGGGTT CCCGACCCCA
CGTGGCGCTG ATACTGCGAC AGAGTTTGAG CGTCAACGAG CGAAGATCAT CAGTGCTATG
GTAGGTATTG ACGCGGATCT GTTTGGTTTG ATGGAGATTG AAAATGATGG CTTTGGCAGT
GATTCTGCGA TTGCGGATCT GGTCTCAGGG CTGAATACAG CTATCGGTGA AACTCGCTAT
GGTTATGTTA ATGCGGGTGG AAGCTCTATC GGAACCGACG CTATTGCTGT TGGAATGATC
TATCGACTCG ACAAAGTTAG CCCACAAGGT GCGGCTAAAA TTCTGTCAAC GGCTAACTCA
CCGTTAGACG ATGCTGGTGC GCCTCTGTTT AATGATGGCA AAAACCGTCC TATGTTGACT
CAGTCCTTCT CTGTTAATGA TAGTGATGAG TCATTTGTTG TTGCAGTCAA TCACTTCAAA
TCAAAAGGTA GTAATTGTGA CAGTCTTGGC GACCCTAACC TTAATGATGG TCAAGGAAAC
TGTAATGTCA CTCGTACCCG TGCAGCGCAA GCTGTAGGCA CTTGGTTAGC GGCTGAATAC
CCACAGGCTC CAGTGCTCTT GATTGGTGAT TTGAACGCCT ACGCACAAGA GAATCCATTA
ACAGCATTAA AAGATGCTGG GTTTACTGAG CTGTTTGATC ACTTAGATAA AGTCGGTGCA
TACTCTTATG TGTTCTCTGG TGAAACGGGT CAGCTAGATC ACGCTTTAGC CAACAGCGAA
CTGATTGACA GCGTAGTGGA TGTTACTGAG TGGCACATCA ATACCGATGA GCCGCGTATA
CTCGACTATA ACGAAGAGTT TAAGTCAGCT TCTCAGATTG AAAACTTATA CAGTGATAGT
GCTTATCGCT CATCAGATCA TGATCCTGTA GTCGTCTCTT TACTGCTTGA AGCAGCTAAT
ATCGCTCCAG TGGCTAGTTT CACTTTCGAT CTGCAAGGTG CTGTGGCTAA CTTTACCAGT
ACCTCTACCG ACGAAGATGG TGATCTGGTC AGTTATGAGT GGACATTTGG CGACGGTAAT
GGCGCTGATG GACAAGCCGT AAGTCATGAG TATGCTCAAG ATGGTGATTA TGTTGTGACA
CTAACGGTGA CCGATGATGG CGGCTTAAGC CATAGTGTTT CCCAAACTGT GACTGTGGTG
ACTGAGCCTG AAAATATGAA GCCAGTTGCT GTTATCCATC ATATCGATCT TTGGTTTATC
GATATCTTTG TATCGCTTAG CTATGACGAA GATGGTTATA TTACTCGCCA TAAGTGGAAG
TTTAATGATG GCAGCAAAAT TAACGGTCCT GTGGCGGTTA AGTTTGCAAG TCGCGCATCT
AAAGTTAAGC TGGTTGTAAC AGACAATGAT GGCTTAAAAG ACAGTGCTAA ATTAAGATTT
TAA
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| Protein sequence | MFTKASLLAL AIGGVSTFAQ AADNLIISEY VEGSSNNKAF ELYNPTTAAL DLSQYEVKFY
FNGNTQAGTT ISLSGSLAPG EVYVVADNDS SADILAIADQ VSNSSFYNGD DALVLMSGGV
VIDSLGQVGF DPGSQWGSGD LSTQNNTLRR NPDMLIADTV VDDEASLNTW LGFAQDDISD
LGMFDGSGPI DPPPPVDLVC HDPFVTIHVL QGQTDVSPYN GQTVEVEAVV TSNQEAGLKG
LFIQMPDDAV DADPLTSEGV FVYTGGDTGY LAGDLVRMQA VVKEFNGLTE LTDLVSHTLC
ASAQAIPSPA SVTLPVADIA DLEAFEGMRV SFTHNLVVNE VYNLGRYGEL LLGSERHFIG
TQVAAPGADA LAVTAANARD AIVLDDGLTA QNPDPVRYPS PGLSADNTVR VGDTVTGLNA
MMHYAFGKYR LMPVDTVNFI AENARTLAPE LAAGGNLTVA SFNVLNYFNG DGAGGGFPTP
RGADTATEFE RQRAKIISAM VGIDADLFGL MEIENDGFGS DSAIADLVSG LNTAIGETRY
GYVNAGGSSI GTDAIAVGMI YRLDKVSPQG AAKILSTANS PLDDAGAPLF NDGKNRPMLT
QSFSVNDSDE SFVVAVNHFK SKGSNCDSLG DPNLNDGQGN CNVTRTRAAQ AVGTWLAAEY
PQAPVLLIGD LNAYAQENPL TALKDAGFTE LFDHLDKVGA YSYVFSGETG QLDHALANSE
LIDSVVDVTE WHINTDEPRI LDYNEEFKSA SQIENLYSDS AYRSSDHDPV VVSLLLEAAN
IAPVASFTFD LQGAVANFTS TSTDEDGDLV SYEWTFGDGN GADGQAVSHE YAQDGDYVVT
LTVTDDGGLS HSVSQTVTVV TEPENMKPVA VIHHIDLWFI DIFVSLSYDE DGYITRHKWK
FNDGSKINGP VAVKFASRAS KVKLVVTDND GLKDSAKLRF
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