| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1899 |
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| Symbol | |
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| ID | 6116162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2338995 |
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| End bp | 2339681 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633402 |
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| Product | ABC transporter related |
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| Protein accession | YP_001760278 |
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| Protein GI | 170726252 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.676555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAAAG TCAATGGATT AACTAAAGAG TACCAGATGG GCAATACCTC TGTGTTTGCA
CTAAGAGGGG TAGAGTTTAC GATTAATCAC AATGAGTTTG TTGCCATCAT GGGACCATCA
GGTTCTGGTA AATCGACATT GATGAATATC ATAGGGTGTT TAGATAAACC TACTAGTGGT
AGCTATCAGT TAAACGAGCA AGAAGTTGCT AGTTTAGATG ATGATGCATT ATCAGCGGTT
CGCAACAAAG AGATAGGTTT CGTCTTTCAA AGTTTCCATC TATTACCGCG AATGAGTGCA
TTGCAAAATG TGTTGTTGCC ATTACGTTTC TCTAACCCTC CAAATCAAGA TAGCCAATAT
GCGAGTGAGT TATTAACTCG GGTGGGTCTA GGGACAAGGC AAGATCATAG ACCAAATCAA
CTGTCGGGTG GTCAGAGACA AAGGGTTGCT ATCGCTCGAG CTCTGGTTAA TCGTCCAGCC
ATTTTACTCG CTGATGAGCC AACTGGTGCC TTAGACAGTA AAACATCTGT TGAGATCATG
GATCTGTTTA CCGACCTGCA CAAAGCGGGA CAGACGATTA TTCTTGTCAC CCATGAAGAG
GAAGTTGCTG CTTATGCACA GCGAGTGATT CGCATGCGGG ACGGTCATAT TGTAGAGATT
GAAGACCGGA GCACCTATGC CGCTTGA
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| Protein sequence | MIKVNGLTKE YQMGNTSVFA LRGVEFTINH NEFVAIMGPS GSGKSTLMNI IGCLDKPTSG
SYQLNEQEVA SLDDDALSAV RNKEIGFVFQ SFHLLPRMSA LQNVLLPLRF SNPPNQDSQY
ASELLTRVGL GTRQDHRPNQ LSGGQRQRVA IARALVNRPA ILLADEPTGA LDSKTSVEIM
DLFTDLHKAG QTIILVTHEE EVAAYAQRVI RMRDGHIVEI EDRSTYAA
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