| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1884 |
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| Symbol | |
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| ID | 6116147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2326512 |
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| End bp | 2327510 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633387 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001760263 |
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| Protein GI | 170726237 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.679311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.322867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTTA ATCCTGATTT TTTCCCGCTC ACTCAACTTG CCACACGCTT TGTTGATCAG
CTAGCGCAGT GCCGCCGTCT AAACCTTAGG GTGCATGAGG CCAGTGAACA TCACGTGTTG
ATTGAGCTGC CCTATGCCCA TGAATTAGTG GGGTATCCGG ATACGGGAGT GATTCACGGC
GGAGTGATCA CAACCTTGAT GGATACGGCA AGTGGCAGCG CAGTGGTTTG CTCTATCTTT
GATAAATATC AGGCGTTAGA GCTTTCTCCA ACCTTAGATC TGCGGGTTGA TTATATGAAA
CCTGCCGATC CCAATAAGCC TGTTTATGGC TTTGCTGAGT GCTATAAAAT ATCTTCTAGT
GTTGCGTTTA CACGTGGGAT TGCTTATCAA GATTCAATTG ATGATCCCAT TGCCCATGCA
GTCGGTTCTT TTATGCGTAT CAGTCCGGAG ATGATTGGGG ATGAGTTTCG TCAAGCTTTG
ATCGGCGAGG AGGTCACTTC TCTATCTGAT GCGTTACCAG ACAGCGAGCA GTGCGTGCAG
GAGCCGATTG TCGCAACAGC CCCTCAACTC GATGTAAAAG AGATAGTAAA AAAAGCCACC
GAGCTGAATG ACTTTAGCCA CCTCTTATCC CATGTTCCCT ATACCGATTT TATTGGTATG
TCTGTGGAGC GATTCGGTGA TGAGCTAGTT TTCAGACTGC CAGCAAAAGA TGACAATATA
GGTAACCCTA TCCTCCCAGC TATTCACGGT GGCGTGATTG CTGGGTTTAT GGAGATGTCG
GCAATTGTTC AGCTTATGGT GTTTATGCAC ACAAGTAAGG TGCCTAAGGT AGTTGATTTT
TCGATTGATT ACTTAAGAGC TGGGTATCAT AAAGACACGT TTGCTGAGTG TAAAATTACC
CGACAGGGGC GCAGGGTGGC CAATGTGAGC ATCAATTGTT GGCAAACGAA CCGTAAAAAG
CTGATTGCTA CAGCAAGGGC TCATTTTTTG ATTGATTAA
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| Protein sequence | MKVNPDFFPL TQLATRFVDQ LAQCRRLNLR VHEASEHHVL IELPYAHELV GYPDTGVIHG
GVITTLMDTA SGSAVVCSIF DKYQALELSP TLDLRVDYMK PADPNKPVYG FAECYKISSS
VAFTRGIAYQ DSIDDPIAHA VGSFMRISPE MIGDEFRQAL IGEEVTSLSD ALPDSEQCVQ
EPIVATAPQL DVKEIVKKAT ELNDFSHLLS HVPYTDFIGM SVERFGDELV FRLPAKDDNI
GNPILPAIHG GVIAGFMEMS AIVQLMVFMH TSKVPKVVDF SIDYLRAGYH KDTFAECKIT
RQGRRVANVS INCWQTNRKK LIATARAHFL ID
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