| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1880 |
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| Symbol | |
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| ID | 6116143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2324102 |
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| End bp | 2324734 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633383 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001760259 |
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| Protein GI | 170726233 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0137892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAG TTATAAACTG GGTAGTTATT TCTCGTTCTA ATCTTCTCAC TGATCTATTG
GACACACGCT GGCCTCAAGA ATTTTTAGTA AAACTACTTA AAATTCCTCC AGAAAAAGCG
GAGCTCGAAG TGTCTGGTGG TAACTTCTCC TTAGTTATCA TAGATCTATC AACTGTGGAT
ATTCAAAAAG CTTACCAAAT TCAGCGCTTT GTTGAAAAAA AGCTATCGGC AAGAGTTGTC
TTCCTTCATT TTCCTCGACA AATTGATGCT CGTTTCCTGA TCCATCCGAC TGTGACTGCA
GGCGTATTTT TCTGTGATGC AGCACTTGAC GCGATTGGCC ATGGTTTGGG AAATATTTTG
AGGGGACAAT CGGTTATACC TGCTGAGCTG TCAGAGCAAA AACAGGATAA TCAATCGCAG
GTTGAGGGAA GTGAGAGCTT AACTATAAGA GAGCGTGAGG TTTTACAAGC ACTGCTAAGT
GGCAGTACTA ATGTCGATAT TGCTAATCAG CTTTTTGTTA GTGAAAGTAC GATAAAGACT
CACCTTTACC GTGCTTTTAG AAAGATAGGT GTATCGAGCC GTGGTCAAGC GATTGCGTGG
GCACAGACAC ACCTGCATGA AGTGCAACAT TAA
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| Protein sequence | MFKVINWVVI SRSNLLTDLL DTRWPQEFLV KLLKIPPEKA ELEVSGGNFS LVIIDLSTVD
IQKAYQIQRF VEKKLSARVV FLHFPRQIDA RFLIHPTVTA GVFFCDAALD AIGHGLGNIL
RGQSVIPAEL SEQKQDNQSQ VEGSESLTIR EREVLQALLS GSTNVDIANQ LFVSESTIKT
HLYRAFRKIG VSSRGQAIAW AQTHLHEVQH
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