| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1879 |
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| Symbol | |
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| ID | 6116142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2322529 |
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| End bp | 2323695 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641633382 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001760258 |
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| Protein GI | 170726232 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00684701 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAGTGA ACGCTGTTTG TATTATCTGG GTGTTGAGCT GTATTTTACT TTTAGGCTGC
AGTAATAGAG CCGTAACTCC TCCTAAACCG AGTTACCCAA ATACCAACGA TCTGCTGTTT
AGTTCAGATA CAACCTCAAT TCCTAGTTTT GATAGTTTAA TACAATTTAC GTCATCTCAA
GTGGAAGATA TATATCGATT TGTTGAAAAA GAAGACATTA CCCAACTTCC GGTAAATGAG
CAGGCTCATC AATACGTCGC AAAAAAGTTA GTTAACTTTA ATTATGAAGG GAAAAATTTA
TCTGCTGCTG AAGCGATGGC GACAGGGAGA GGTAACTGCA TGACCTTGGC TCTGCTGACT
TATGCTGTAG CAAAAGAGCT CAATGTCGGT GTAGTTTTTC AAGTTATGCA TACGGCGCCT
ATGCTTCAGG AGATCAGGTC TAATTTGGCG GTCACATCAG ATCATGTGCG AACGTTTCTT
TATGAGGAGG ATAAAAGCAG TAGTAAAGGT TTTTATCTCT CTGGTAGAGA CTACGCGATA
ATGGACTATT TTCCTGATAG TTACGATAGA GGTGGAGCTT TTATTGATGA AAGCCAATTT
ATTGCCATGT ATTACCGAAA CTTAGCGGCT GATGCCTTAC TTGATAATGA TCTGGCTCTT
TCATTTGCAC TGTTAAAGCA AGGAGCAAGC TATGCACCTG ATTATGCACC TCTGCTTAAT
ATGATGGCTG TTGTACATCG AAGAGCGGGT GATGAAAAGA CCGCTGAGGA GTTTTATCTG
TATGGAATGG AGGTGGCTAA ATCTAAGATC ACTCTCTTGA GCAATTATCA CCATTTACTG
ACCTCTCAAG GAAAGGTTGA TTCTGCAAAT GAGATAAAGA GAACCTTACT TTTTCTCGAT
GATCCAACAC CCTATAACTG GTACCTGCTT GGTAGGAGTT CGCTTAAGGA GGGAGATTAC
TTTAGTGCAA TTATCTATCT GGAAAAGTTT TTAGAAAATA GTCCATATTA TCACCAAGCA
TATATAGAGT TAGCCAGTGC TCAGCATGCT TTGGGGAAAA CCTATGCTGC TGAAAAATCG
TTAAAAACGG CTTTGGAATA TACATATCTT TCTAACACTC AACGTCTATA TCAGGCTAAA
TTAACTTGGC TTAAACAAAG TCGGTAG
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| Protein sequence | MRVNAVCIIW VLSCILLLGC SNRAVTPPKP SYPNTNDLLF SSDTTSIPSF DSLIQFTSSQ
VEDIYRFVEK EDITQLPVNE QAHQYVAKKL VNFNYEGKNL SAAEAMATGR GNCMTLALLT
YAVAKELNVG VVFQVMHTAP MLQEIRSNLA VTSDHVRTFL YEEDKSSSKG FYLSGRDYAI
MDYFPDSYDR GGAFIDESQF IAMYYRNLAA DALLDNDLAL SFALLKQGAS YAPDYAPLLN
MMAVVHRRAG DEKTAEEFYL YGMEVAKSKI TLLSNYHHLL TSQGKVDSAN EIKRTLLFLD
DPTPYNWYLL GRSSLKEGDY FSAIIYLEKF LENSPYYHQA YIELASAQHA LGKTYAAEKS
LKTALEYTYL SNTQRLYQAK LTWLKQSR
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