| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1875 |
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| Symbol | |
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| ID | 6116138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2316070 |
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| End bp | 2318712 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633378 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_001760254 |
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| Protein GI | 170726228 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.654316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000051224 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGATGCA TACAAACGAC TCAAGTGCCA GATGCAAGGT TTTGTCGAGA TGAAGATGAC
TTAAAGCCCA AGTTACTGGT TGTGGGTAAC GGCATGGTGG GTCACCATTT TATAGAGCAG
CTTTGTGAAC AAGGCCTTAA TGAAAGATAT CAAGTGGAGG TATTTGGCGC TGAAAATCTG
CCAGCCTATG ACAGGGTTCA GCTCTCTAAA TATTTTGACT CAGGATCTGC TGACTCTTTG
ATGTTGGCAA GTGTTGATGC CTATCAAACC AAAGGGGTCT CGCTTCATCT TGGCAAAGAG
GTAGTGGGTC TGGATATTGA GAGCAGGCAT CTATATACCT CCGGTGATGA GACGTGGCGT
TATGACAAAT TAGTGCTGGC AACAGGCTCT TATCCTTTTG TACCTCCTAT TGAGGGAAAA
GATCGTGAAA AGTGTATGGT TTATCGCACC ATTGATGATC TGCACGCTAT TGAACATGCG
GCTAAAGATG CCACCTCTGG CGTGGTGATT GGCGGAGGAC TTTTAGGGCT TGAAGCCGCA
AATGCCTTGC TGACTTTGGG TTTAGATACT CATGTTGTGG AGTTCGCGCC TCAGTTAATG
CCTGTACAAC TTAATGACAA GGCCGGTGAG CTACTTTGCC AGAAGATTGA AGCGCTTGGG
GTATCTGTTC ATACCAGTAA GGCAACAACT GCCATTATTG AGGGGGAGAG CTCAACTCAT
CGCATGACAT TCAGTGATGG TAGTCATTTA GAAACTGACT TAATCGTCTT CTCGGCTGGG
ATCCGTCCTC AAGATAGCCT AGCAAGAGTC AGTGGCCTTG AGGTTGGTGA GCGTGGTGGG
ATTGCCATTG ATGACTATTG CTTAACCTCA AATGAAGATA TCTATGCCAT CGGTGAGTGT
GCTCTCTGGC AGCAGCAAGT TTTTGGGCTG GTGGCGCCGG GCTATCAGAT GGCGCGGACT
GTTATCTCTC ATCTGTTATC GAGCAGTAAG GGAGCTGACT CAGCTCCTTT TAGTGGCGCA
GATATGAGCA CTAAGCTTAA GTTGCTAGGG GTTGATGTCG CATCTATTGG CCAAAGCCGA
GGCTTTGATA ATGCAAAGTT TGTTGAGCTT AGTGACAATC AAGTAGGCAC CTATAAAAAG
CTTTGGTTGG ATGAAACAGG AGGCTACCTA AAAGGGGCTG TGCTAGTCGG TGATGTGACA
GATTACAACT TTCTCCTCAA TCAATATCTT TCAGGTAGTG CGCTAACAAC TCCCGCTATT
GAACTGTTTC AACAAGATGC TGATGCCCCT TTAACGCTCA ATGATGATGC CGTTATCTGC
TCATGCCATC AAGTCACCAA AGCAGACATA GTTGCTAGGG TGATAGAGGG GGATCATTCT
CTTGCGGCCA TTAAAGGTTG CACCAAAGCG GCATCGGGCT GTGGAGGCTG TAGTGCCCTG
GTCCAGCAGG TGATCACTCA AACCATGGAG TCTCAAGGTC TTGAGGTCTC TAAAGGGATA
TGTTGTCACT TTGAGCATGA CAGACAATCA CTGTTTCATC TATGCCAAGT TGAGTCTATT
ACTAATTTCT CCTCTTTGAT AAAACGTCAT GGAAAAGTGG GGACGAGCCA ACTCGGAATT
GGATGCGATA TCTGTAAACC CCTAGCGGCA TCGATTTTTG CCACCCTTGA GAATGAGTAT
GTTCTCAATC AGCAGCATGC CAACTTGCAA GACACTAATG ACGCTTATCT GGGCAATTTA
CAAAAAGATG GCTCATATTC TGTGGTCCCT CGCATTGCTG GGGGAGAGAT AAGCCCTGAT
AAATTGATAG CTCTAGGTGA GATAGCCAAA AAGCATGACT TGTATACTAA GATAACCGGT
GGACAGCGTA TCGATCTCTT TGGCGCACAG CTCTCCGAGC TTCCCATGAT CTGGCAGGAG
TTAGTGGATC AGGGGTTTGA AACTGGCCAT GCTTACGGCA AGTCACTTCG AACAGTGAAA
TCCTGTGTCG GCAGCACTTG GTGCCGATAT GGTGTACAAG ACTCGGTGGG TTTAGCGATA
GCCCTTGAGA ATCGCTATAA AGGCTTGAGA TCGCCACACA AGTTAAAGTT TGCGGTATCG
GGTTGTACTC GAGAGTGTGC AGAAGCGCAG AGTAAAGATA TTGGCATTAT TGCCAGCGAT
AAAGGCTGGA ATCTTTATGT TGGTGGCAAT GGAGGGATGA GGCCAAGACA TGGGGATCTG
TTTGCAACCG ATCTTAGCAC CAAAGAGTTA GTGCGCTTTA TCGATCGGAT CTTGATGTTT
TATTCCAAAA CAGCTGCACG TTTGCAGCGT ACCTCTGTTT GGCTTGAATC CCTCGAAGGT
GGGCTAGCCT ATCTTCAATC TGTGATTATC GATGACAGCT TAGGTCTGAC ATCAGAGCTT
GAGAGCCATA TGGAGAAAGT GGTTACTAGC TATCAATGTG AGTGGAAAAC CAGTCTAGAG
AGTCCAGAGT TTTTATCTCG ATTTAGTGAA TACGTAAATC CTGAACAGAT GCCTGCATTT
GAGTTAGAGC GGTATCGATA CAGTCGTGGC CAACGTTTCC CTGCTTCCAC ACCTGACAGA
ATTCCTTTGA TCAATATTCC TCTTAGTGAA GATGTTCAAT TGGCTGAATT AAATGAAGTT
TAA
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| Protein sequence | MGCIQTTQVP DARFCRDEDD LKPKLLVVGN GMVGHHFIEQ LCEQGLNERY QVEVFGAENL
PAYDRVQLSK YFDSGSADSL MLASVDAYQT KGVSLHLGKE VVGLDIESRH LYTSGDETWR
YDKLVLATGS YPFVPPIEGK DREKCMVYRT IDDLHAIEHA AKDATSGVVI GGGLLGLEAA
NALLTLGLDT HVVEFAPQLM PVQLNDKAGE LLCQKIEALG VSVHTSKATT AIIEGESSTH
RMTFSDGSHL ETDLIVFSAG IRPQDSLARV SGLEVGERGG IAIDDYCLTS NEDIYAIGEC
ALWQQQVFGL VAPGYQMART VISHLLSSSK GADSAPFSGA DMSTKLKLLG VDVASIGQSR
GFDNAKFVEL SDNQVGTYKK LWLDETGGYL KGAVLVGDVT DYNFLLNQYL SGSALTTPAI
ELFQQDADAP LTLNDDAVIC SCHQVTKADI VARVIEGDHS LAAIKGCTKA ASGCGGCSAL
VQQVITQTME SQGLEVSKGI CCHFEHDRQS LFHLCQVESI TNFSSLIKRH GKVGTSQLGI
GCDICKPLAA SIFATLENEY VLNQQHANLQ DTNDAYLGNL QKDGSYSVVP RIAGGEISPD
KLIALGEIAK KHDLYTKITG GQRIDLFGAQ LSELPMIWQE LVDQGFETGH AYGKSLRTVK
SCVGSTWCRY GVQDSVGLAI ALENRYKGLR SPHKLKFAVS GCTRECAEAQ SKDIGIIASD
KGWNLYVGGN GGMRPRHGDL FATDLSTKEL VRFIDRILMF YSKTAARLQR TSVWLESLEG
GLAYLQSVII DDSLGLTSEL ESHMEKVVTS YQCEWKTSLE SPEFLSRFSE YVNPEQMPAF
ELERYRYSRG QRFPASTPDR IPLINIPLSE DVQLAELNEV
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