Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1868 |
Symbol | |
ID | 6116131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2309322 |
End bp | 2310113 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641633371 |
Product | methyltransferase type 11 |
Protein accession | YP_001760247 |
Protein GI | 170726221 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | [TIGR02072] biotin biosynthesis protein BioC |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00760268 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000322294 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAACCCG AAGTAGTCAT AGATGGGGTT AACAAGATAA GCGACACTAA TATCGTTGCT GAGCGTTTCT CTGCTGCAGC AAAAACATAC TCCCGCCATA ACTGTTTGCA AAAGCGTTCA GCGCAAGGCT TACTCAAAGA GATGAGTCCT TGCGGTGTCC TGCTCGATAT CGGTTGTGGA CCGGGTACAG ACTTTAGTCA TTTTAAACGC GTAGTGGAGG TTATTAGCCT CGATATCGCG CCAGGCATGC TCGAGCAGTT GTCCATTAAC TTCCCGTCTT ATACAACTAT CTGCGCCGAT GCTAAAGCGA TCCCTCTGCC TGAGAATAGT GTTGATACTG TGTATTCCAA TCTCGCATTG CAGTGGTGTG ACGATCTTCA ACAGTCTTTT AAAAGTACTG GGGCGGCATT AAAGTCTGGA GGTGATTACT ATCTCTCTGT TGTGGCCGAG GGCAGTTTAC CTGAACTGGT CGAGCTGGGT TTTAGGGTGA ATAGCTTCAG AAGTATGACC GATATCGTTT CACAGTTTGA TCCTGAGTTT TGGTTAGTTA AGTCAGCCAA GCTTGAACCT ATTACGGTTT ATTTCGATGA TTTAAAATCT TTGCTCTACT CCATTAAAGG GGTAGGGGCG TCGATAGTAT CAGATGAGAA AAGTTCAGAG CAGAACTTGA GTCACGGCAT TCGCGGCCGA GAAGATTGGA AAGAGCGGTT AGCGAGGGCG GAGTGCATAC GCCAAGCTAA AGGACTTCCT TTGACCTACC ATATTGCGCA GCTCCATGTA GAGAGACGAT AA
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Protein sequence | MKPEVVIDGV NKISDTNIVA ERFSAAAKTY SRHNCLQKRS AQGLLKEMSP CGVLLDIGCG PGTDFSHFKR VVEVISLDIA PGMLEQLSIN FPSYTTICAD AKAIPLPENS VDTVYSNLAL QWCDDLQQSF KSTGAALKSG GDYYLSVVAE GSLPELVELG FRVNSFRSMT DIVSQFDPEF WLVKSAKLEP ITVYFDDLKS LLYSIKGVGA SIVSDEKSSE QNLSHGIRGR EDWKERLARA ECIRQAKGLP LTYHIAQLHV ERR
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