Gene Swoo_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1868 
Symbol 
ID6116131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2309322 
End bp2310113 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content46% 
IMG OID641633371 
Productmethyltransferase type 11 
Protein accessionYP_001760247 
Protein GI170726221 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR02072] biotin biosynthesis protein BioC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00760268 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000322294 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAACCCG AAGTAGTCAT AGATGGGGTT AACAAGATAA GCGACACTAA TATCGTTGCT 
GAGCGTTTCT CTGCTGCAGC AAAAACATAC TCCCGCCATA ACTGTTTGCA AAAGCGTTCA
GCGCAAGGCT TACTCAAAGA GATGAGTCCT TGCGGTGTCC TGCTCGATAT CGGTTGTGGA
CCGGGTACAG ACTTTAGTCA TTTTAAACGC GTAGTGGAGG TTATTAGCCT CGATATCGCG
CCAGGCATGC TCGAGCAGTT GTCCATTAAC TTCCCGTCTT ATACAACTAT CTGCGCCGAT
GCTAAAGCGA TCCCTCTGCC TGAGAATAGT GTTGATACTG TGTATTCCAA TCTCGCATTG
CAGTGGTGTG ACGATCTTCA ACAGTCTTTT AAAAGTACTG GGGCGGCATT AAAGTCTGGA
GGTGATTACT ATCTCTCTGT TGTGGCCGAG GGCAGTTTAC CTGAACTGGT CGAGCTGGGT
TTTAGGGTGA ATAGCTTCAG AAGTATGACC GATATCGTTT CACAGTTTGA TCCTGAGTTT
TGGTTAGTTA AGTCAGCCAA GCTTGAACCT ATTACGGTTT ATTTCGATGA TTTAAAATCT
TTGCTCTACT CCATTAAAGG GGTAGGGGCG TCGATAGTAT CAGATGAGAA AAGTTCAGAG
CAGAACTTGA GTCACGGCAT TCGCGGCCGA GAAGATTGGA AAGAGCGGTT AGCGAGGGCG
GAGTGCATAC GCCAAGCTAA AGGACTTCCT TTGACCTACC ATATTGCGCA GCTCCATGTA
GAGAGACGAT AA
 
Protein sequence
MKPEVVIDGV NKISDTNIVA ERFSAAAKTY SRHNCLQKRS AQGLLKEMSP CGVLLDIGCG 
PGTDFSHFKR VVEVISLDIA PGMLEQLSIN FPSYTTICAD AKAIPLPENS VDTVYSNLAL
QWCDDLQQSF KSTGAALKSG GDYYLSVVAE GSLPELVELG FRVNSFRSMT DIVSQFDPEF
WLVKSAKLEP ITVYFDDLKS LLYSIKGVGA SIVSDEKSSE QNLSHGIRGR EDWKERLARA
ECIRQAKGLP LTYHIAQLHV ERR