Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1863 |
Symbol | |
ID | 6116126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2304119 |
End bp | 2304781 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641633366 |
Product | cob(II)yrinic acid a,c-diamide reductase |
Protein accession | YP_001760242 |
Protein GI | 170726216 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | [TIGR02476] cob(II)yrinic acid a,c-diamide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000280674 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATAA CCGAAAACGA ACGTGATGCT GTCTATAAAA CTATTTTTGC TCGACGAGAT GTTCGTGGCG AATTCTCCTC TGAGCCGATC CCTGAAGATG TGTTGCATAG AGTATTAACC GCTGCTCATC ATGCACCTAG CGTCGGTTTT ATGCAGCCTT GGGATTTTGT ACTGGTTAAT GAGCTGGAAA CGAAAAAGAA GATAAAGGCT GGCTTTGATA GTGCCAATCA TGAATCTGCA GAACAGTTTA ATGATGACAA AGCGGTTCAA TACCGACAAC TAAAATTAGA GGGGATACTT GAAGCGCCGC TGGGTATCTG TGTGACCTGC GATCGACACC GCAATGGCCC AACTGTTTTA GGTCGTACAA TTAAAGCTGA GATGGATCTA TATAGCAGTG TGTGTGCTGT ACAGAATCTT TGGCTAGCAG CCAGAGCAGA AAATCTAGGT GTCGGTTGGG TGAGTATTCT TCATGACTCA GTACTAAGAG ATGCACTTAA CATCCCTGAA GAGATTGAGA TCATCGCCTA TCTGTGTGTC GGCTACGTTT CCCATTTCAA AGATAAGCCG GAATTAGAAA CCTTAGGTTG GCAGCCTAGA CGTGATGTTA ACTCTGCAAT TCATTACGGC ACCTGGTCTA GATCTGCGGA CACAGATGCC TAA
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Protein sequence | MKITENERDA VYKTIFARRD VRGEFSSEPI PEDVLHRVLT AAHHAPSVGF MQPWDFVLVN ELETKKKIKA GFDSANHESA EQFNDDKAVQ YRQLKLEGIL EAPLGICVTC DRHRNGPTVL GRTIKAEMDL YSSVCAVQNL WLAARAENLG VGWVSILHDS VLRDALNIPE EIEIIAYLCV GYVSHFKDKP ELETLGWQPR RDVNSAIHYG TWSRSADTDA
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