Gene Swoo_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1863 
Symbol 
ID6116126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand+ 
Start bp2304119 
End bp2304781 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content44% 
IMG OID641633366 
Productcob(II)yrinic acid a,c-diamide reductase 
Protein accessionYP_001760242 
Protein GI170726216 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID[TIGR02476] cob(II)yrinic acid a,c-diamide reductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.00000280674 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATAA CCGAAAACGA ACGTGATGCT GTCTATAAAA CTATTTTTGC TCGACGAGAT 
GTTCGTGGCG AATTCTCCTC TGAGCCGATC CCTGAAGATG TGTTGCATAG AGTATTAACC 
GCTGCTCATC ATGCACCTAG CGTCGGTTTT ATGCAGCCTT GGGATTTTGT ACTGGTTAAT 
GAGCTGGAAA CGAAAAAGAA GATAAAGGCT GGCTTTGATA GTGCCAATCA TGAATCTGCA 
GAACAGTTTA ATGATGACAA AGCGGTTCAA TACCGACAAC TAAAATTAGA GGGGATACTT 
GAAGCGCCGC TGGGTATCTG TGTGACCTGC GATCGACACC GCAATGGCCC AACTGTTTTA 
GGTCGTACAA TTAAAGCTGA GATGGATCTA TATAGCAGTG TGTGTGCTGT ACAGAATCTT 
TGGCTAGCAG CCAGAGCAGA AAATCTAGGT GTCGGTTGGG TGAGTATTCT TCATGACTCA 
GTACTAAGAG ATGCACTTAA CATCCCTGAA GAGATTGAGA TCATCGCCTA TCTGTGTGTC 
GGCTACGTTT CCCATTTCAA AGATAAGCCG GAATTAGAAA CCTTAGGTTG GCAGCCTAGA 
CGTGATGTTA ACTCTGCAAT TCATTACGGC ACCTGGTCTA GATCTGCGGA CACAGATGCC 
TAA
 
Protein sequence
MKITENERDA VYKTIFARRD VRGEFSSEPI PEDVLHRVLT AAHHAPSVGF MQPWDFVLVN 
ELETKKKIKA GFDSANHESA EQFNDDKAVQ YRQLKLEGIL EAPLGICVTC DRHRNGPTVL 
GRTIKAEMDL YSSVCAVQNL WLAARAENLG VGWVSILHDS VLRDALNIPE EIEIIAYLCV 
GYVSHFKDKP ELETLGWQPR RDVNSAIHYG TWSRSADTDA