| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1854 |
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| Symbol | codB |
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| ID | 6116117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2290038 |
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| End bp | 2291225 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633357 |
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| Product | cytosine permease |
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| Protein accession | YP_001760233 |
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| Protein GI | 170726207 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.382094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000028856 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTGATGC TGGGATTAAC CTTCTTTTCA GCAAGTATGT GGACAGGAGG AACACTTGGA
ACAGGACTCT CCTTTAATGA TTTTATTCTC GCGGTTCTCA TTGGTAATTT AATTCTCGGT
ATTTATACTT CATTTCTTGG TTACATCGGC GCTCAATCTG GCCTCTCTAC ACATCTTCTG
GCTCGTTACT CTTTCGGTTT AAAAGGCTCC TGGCTTCCCT CTCTTCTTCT CGGTGGAACA
CAAGTTGGTT GGTTTGGTGT TGGTGTCGCG ATGTTTGCCA TCCCAGTACA TAAGGCGACA
GGAATAGACA CCAACCTGCT TATTCTTATC TCTGGTCTAC TGATGACCGC CACCGTTTAC
TTCGGCATTG CCGCCATCAT GATCTTATCT GCCATCGCCG TTCCCGCTAT TGCCCTCTTC
GGTGGTTTCT CAGTACTTCA GGCGGTTGAC AGTATGGGTG GCGTCGATGG CTTAGTAGCC
TTTACGCCCG AGGAGCCAAT GGCCTTCTCT ACCGCGCTGG TTCTGGTTGT CGGGTCGTTT
ATTTCAGCAG GAACACTCAC CGCTGATTTT GTTCGATTTG GTAAAAAACC GATGAATGCT
GTATTTGTCA CTATGTTTGC CTTCTTCATT GGCAATTCGT TGATGTTTAT CTTTGGCGCA
GCTGGCGCGG CAGCAACAGG CCAAGCGGAT ATTTCAGAGG TCATGATTGC TCAAGGCTTA
CTGATCCCAG CAATTATTAT CTTAGGGTTA AACATCTGGA CCACTAATGA TAATGCGCTC
TACGCTTCCG GTTTAGGCTT TTCCAATATC ACAGGCCTTC CAAGTAAGTA CCTGTCGGTA
TTTAACGGCA TCATCGGCAC GCTTTGCGCG CTTTGGCTAT ATAATAACTT CGTGGGATGG
CTCACCTTTC TGTCAGCAGC TATCCCCCCA ATTGGCGGTA TCATCATCGC TGACTTCTTA
AGAAACCGTG AAAAGTACAA AGATTTTGCT AATGCAAAAT TCGACACAGT TAACTGGGCC
GCTATTTTAG GCGTCGCGAT AGGTGTTGCT GCAGGCCACT TGCTACCAGG CATAGTGCCA
ATCAATGCAG TACTGGCTGG TGCACTAAGT TATCTCGTAA TAGACACTCT GATTAAACGT
AAAACAGTTC CATCAAAATC AACTTGTAAA AATGCAACTA ATGCATAA
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| Protein sequence | MVMLGLTFFS ASMWTGGTLG TGLSFNDFIL AVLIGNLILG IYTSFLGYIG AQSGLSTHLL
ARYSFGLKGS WLPSLLLGGT QVGWFGVGVA MFAIPVHKAT GIDTNLLILI SGLLMTATVY
FGIAAIMILS AIAVPAIALF GGFSVLQAVD SMGGVDGLVA FTPEEPMAFS TALVLVVGSF
ISAGTLTADF VRFGKKPMNA VFVTMFAFFI GNSLMFIFGA AGAAATGQAD ISEVMIAQGL
LIPAIIILGL NIWTTNDNAL YASGLGFSNI TGLPSKYLSV FNGIIGTLCA LWLYNNFVGW
LTFLSAAIPP IGGIIIADFL RNREKYKDFA NAKFDTVNWA AILGVAIGVA AGHLLPGIVP
INAVLAGALS YLVIDTLIKR KTVPSKSTCK NATNA
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