| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1853 |
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| Symbol | |
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| ID | 6116116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2288729 |
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| End bp | 2290027 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641633356 |
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| Product | cytosine deaminase |
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| Protein accession | YP_001760232 |
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| Protein GI | 170726206 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0471494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000346653 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAGCTG CAAATATGCT GATCCAAAAC ATTACTCTCC AAGGCAAGCA AGGCCTGCAT
CAGATCCTAA TTGAAGGTGG AAAGTTCCAA ACTATCGCCC CAATGACTGA GCACTTACAC
TTCAGCTCTG CAGATATCTC TGGCGAGCAC CTTGACGGTG AAGGCGGCAT GGCTATCGCC
CCTTTTTGTG AACCCCATGT ACACCTAGAC ACCACACAAA CAGCAGGAGA GCCAAGCTGG
AATATATCTG GAACTCTGTT TGAAGGGATT GAACGTTGGT CTGAGCGTAA ATCTATGCTC
TCAATCGAAG ATGTGAAAAG CCGAGCTAAG CAGACACTGA AATGGCAGAT AGCCAACGGT
ATCCAACATG TTCGCACCCA TGTCGATGTC TCCGACCCAA CACTTATCGC CCTTAAAGCC
ATGCTTGAAG TTAAAGAGGA GATGAAGCAA TGGGTGGATA TTCAGATCGT TGCTTTCCCG
CAGGAGGGGA TCCTCTCCTA CCCCAATGGT AAAGAGTTAC TCGAAGAGGC GGTCAAATTA
GGTGCTGACG TCATAGGTGC AATTCCTCAC TTTGAGTTCA CCCGTGAATA TGGTGTCGAG
TCTCTGCACT TTGTCTTTGA GCTTGCCCGC AAGTATGACC GTCTTATCGA CGTTCACTGC
GATGAGATCG ATGACGAACA ATCACGCTTT GTGGAAACGG TTGCCGCTCT GGCCCATAAA
TACGATATGG GAGAACGAGT CACTGCCAGC CACACAACAG CGATGCACTC ATACAATGGT
GCCTATGCCT CACGTCTGTT CCGTCTACTT AAGATGTCGG GCATAAATTT TGTCGCCAAT
CCGCTAGTCA ATATTCACCT GCAAGGTCGT TTCGATGATT ATCCTAAACG CCGCGGCATC
ACCCGAGTCA AAGAGATGCT GGCAGCCAAC ATTAATGTCT GTTTTGGTCA TGATGATATC
TTCGATCCAT GGTATCCATT GGGCACTGCA AATATGCTGC AAGTACTACA TATGGGTCTG
CATGTATGTC AGATTATGGG TTATGAGCAG ATAAATGACT CGCTAGCCCT TATCAGCAGC
AAATCAGCAC GTACCCTGAA TATTCAGAAC AGCTATGGGA TAGAGATAGG CAAGCCAGGC
AGCTTACTGA TCCTTCCTGC CGATAATGGT TTTGATGCCG TGCGCCGCCA AGTGCCAGTA
CGTTACTCTG TACGCCACGG AAAGCTGCTC GCAGAAACTC AAGTTGCAAC AACACAAATT
CATTTAGAAG CAGCTGAAAA CATCACTTTT CGTCGTTAA
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| Protein sequence | MPAANMLIQN ITLQGKQGLH QILIEGGKFQ TIAPMTEHLH FSSADISGEH LDGEGGMAIA
PFCEPHVHLD TTQTAGEPSW NISGTLFEGI ERWSERKSML SIEDVKSRAK QTLKWQIANG
IQHVRTHVDV SDPTLIALKA MLEVKEEMKQ WVDIQIVAFP QEGILSYPNG KELLEEAVKL
GADVIGAIPH FEFTREYGVE SLHFVFELAR KYDRLIDVHC DEIDDEQSRF VETVAALAHK
YDMGERVTAS HTTAMHSYNG AYASRLFRLL KMSGINFVAN PLVNIHLQGR FDDYPKRRGI
TRVKEMLAAN INVCFGHDDI FDPWYPLGTA NMLQVLHMGL HVCQIMGYEQ INDSLALISS
KSARTLNIQN SYGIEIGKPG SLLILPADNG FDAVRRQVPV RYSVRHGKLL AETQVATTQI
HLEAAENITF RR
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