| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1847 |
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| Symbol | |
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| ID | 6116110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2283795 |
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| End bp | 2285036 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633350 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001760226 |
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| Protein GI | 170726200 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000167707 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00145511 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTAACA AAGTGAAGAT AGAGCCGCTT ATTGAGATTA AAGATCTCTA CAAGGTTTTT
GGAAAAAAGC CAGCGAGTGT GATGCCCATG GTTCGAGAGG GGTTATCTAA AGATGACATC
TTGGCTCAAA CGGGTCACAC AGTTGGTTTA AAAGCGATAA ACCTTGATGT TTATAAAGGT
GAAATTTTCG TCATTATGGG CTTGTCTGGC TCAGGAAAGT CTACATTAAT CCGCCATTTC
AATCGCCTTA TCGATCCCAC AGAGGGGCAG ATATTGGTCG AGGGAACGGA TGTGATGAAA
TTAAATACCA AGGAGCTGGA AACATTTCGC CGTAAAAAGA TGGCGATGGT TTTTCAACGC
TTTGGTTTGA TGCCCCATAG AAACGTTCAG GACAACGTGG CTTATGGGCT AAGTGTTCAA
GGAGTTGATA AAGCCACCAG AGTTGATAAA GCAAACAAGT GGTTAGAGAC TGTGGGACTT
GCTGGTTATG AGAAGCAGTA CCCATCGCAG CTTTCTGGCG GTCAGCAGCA ACGTGTCGGT
CTTGCAAGAG CCTTATGTAC AGATGCTGAA ATCTTGTTGA TGGATGAGGC TTTTTCCGCG
CTCGATCCCT TGATCCGCAG TGAGATGCAA GACCAATTGG TTGAGCTGCA AAAAGAGCTA
AGTAAAACCA TTATCTTCAT TACTCACGAC TTAGATGAAG CCCTAAGAAT TGGTGATCGT
ATCGCGATTT TAAAAGATGG CGATCTTATT CAACTTGGGG AGCCCGTCGA CATTCTGCTT
AATCCTGCCG ATGACTATGT TGAAGCTTTT GTTAAAGATG TGAACCGAGC ACGGGCATTA
ACAGTAGATA CAGTGATGAA GCCGCCGGCC TACCGTTTGA CGGCAGAGAC CATAGGTGAA
GCACTAAAAG AGATGAGACA GAATTCAGCC AACTACGCCT ACTACATGAC CGAAGAGGGC
TTTCAGGGAG TGGTCTGTGA GAAAGCGCTT GAGAGTGCTG CTGAAGATAA TGCCGCCGCA
CCAATGGATG AGTTTAAAGT AGAAGAGATG AGTGTGCTCT CACCGGATGC ACCGCTGGAA
AGTATTATTC CTGCCACGAT GAAGTCAGAT TTTCCAATGC CAGTCGTGGA TGATGATGGA
GACCTACAAG GCCTCCTTTC AAGAGAAGAT CTGGCTGAGG TACTGTCAGA TTTTTACAAA
GATGAAAAAG ATGAAGTAGT CACTGAGTCT AAAACAGATT AA
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| Protein sequence | MSNKVKIEPL IEIKDLYKVF GKKPASVMPM VREGLSKDDI LAQTGHTVGL KAINLDVYKG
EIFVIMGLSG SGKSTLIRHF NRLIDPTEGQ ILVEGTDVMK LNTKELETFR RKKMAMVFQR
FGLMPHRNVQ DNVAYGLSVQ GVDKATRVDK ANKWLETVGL AGYEKQYPSQ LSGGQQQRVG
LARALCTDAE ILLMDEAFSA LDPLIRSEMQ DQLVELQKEL SKTIIFITHD LDEALRIGDR
IAILKDGDLI QLGEPVDILL NPADDYVEAF VKDVNRARAL TVDTVMKPPA YRLTAETIGE
ALKEMRQNSA NYAYYMTEEG FQGVVCEKAL ESAAEDNAAA PMDEFKVEEM SVLSPDAPLE
SIIPATMKSD FPMPVVDDDG DLQGLLSRED LAEVLSDFYK DEKDEVVTES KTD
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