| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1846 |
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| Symbol | |
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| ID | 6116109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2282906 |
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| End bp | 2283802 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633349 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001760225 |
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| Protein GI | 170726199 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00873954 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00370513 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGATT CTTGGCTGAG CAAATTTCCT AAAATGGATC GTGCTGATCT GCTGGAGATA
CGAAAGTCAT TAGATGGCGC TTTTCGTGAT TTTTCCCGTG AATATGGTGA TGAAATAGAG
TCCTTTTTCA GCCCTTTACT TGATTTTTTG ATCTGGTTTG AAAAGCTATT AGTACAATCC
CCATGGTGGG CGGTACTCAT TGTTATTACT GCGATGGTTT ATCTCGCCAG TCGTTCCTGG
AAACTATCTT TAGGTGTGGT TGTGTCGTTT TTGCTTATCG GTTATTTCGG TATGTGGGAG
GATACGATGC GTACGTTAAG TATTATCACT GTTTGTACGC TTTTAGCCAT TATATTGGGC
GTCCCTATAG GGATCTTTAT GGCACGCAGC GACCGAACAC AATCTGCTGT CACCCCCATT
TTAGATGTCA TGCAGACCAT GCCCGCGTTT GTCTACCTTA TCCCTGTGGT GATGCTGCTT
GGGATCGGCA AAGTTCCTGG CGTAATTGCC GTGGTTATCT ATGCAATTCC ACCGGTTATT
CGCCTGACAA ACTTAGGGAT CAGACTTGTC GATAAAGAGG TACTTGAAGC TGCGACGGCC
TATGGAGCCA ATAAGATGCA GCGCTTGTTA GGCGTACAAC TGCCCCTTGC TGCTCCAACG
ATTATGGCTG GGATTAACCA AACCATTATG ATGGCGTTGG GGATGGTAGT GATTGCGTCG
ATGATTGGTG TAAAGGGACT AGGTCAACCT GTACTTAAAT CTATTACTAA TCAGTATTTT
ACCTTAGGGC TTTTCAATGG TTTAGCCATT GTGGCGTTAG CTATCATTTT CGACAGAGCC
TCTCAAGCAT ACGCTAAGCG TTCTCAGAAG CATTTGCAGG ATGGTCATAA TGTCTAA
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| Protein sequence | MADSWLSKFP KMDRADLLEI RKSLDGAFRD FSREYGDEIE SFFSPLLDFL IWFEKLLVQS
PWWAVLIVIT AMVYLASRSW KLSLGVVVSF LLIGYFGMWE DTMRTLSIIT VCTLLAIILG
VPIGIFMARS DRTQSAVTPI LDVMQTMPAF VYLIPVVMLL GIGKVPGVIA VVIYAIPPVI
RLTNLGIRLV DKEVLEAATA YGANKMQRLL GVQLPLAAPT IMAGINQTIM MALGMVVIAS
MIGVKGLGQP VLKSITNQYF TLGLFNGLAI VALAIIFDRA SQAYAKRSQK HLQDGHNV
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