Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1839 |
Symbol | sucC |
ID | 6116102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2275262 |
End bp | 2276428 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641633342 |
Product | succinyl-CoA synthetase subunit beta |
Protein accession | YP_001760218 |
Protein GI | 170726192 |
COG category | [C] Energy production and conversion |
COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00631921 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.060899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTGC ATGAGTATCA GGCGAAATCT CTATTTGCCG AATATGGTTT ACCAGTGTCA GAAGGCTTTG CATGTGATAC AGCTCAAGAA GCAGTAGAAG CAGCAGGTCA TATTGGCGGT GATATGTGGG TTGTTAAGTG TCAAGTACAC GCTGGCGGCC GTGGTAAAGC AGGTGGCGTA AAAGTTACTG GCGATAAAAA CGAAATCAGA GCATTTGCTG AACATTGGTT AGGTAAGAAC TTAGTGACTT ACCAAACAGA TGAGAAAGGT CAGCCTGTTG CTAAGATTTT AGTAGAAAGC TGTACTGACA TCGCTAATGA ATTGTACCTA GGTGCAGTTG TTGACCGTGC TTCACGTCGC GTTGTATTTA TGGCATCTAC TGAAGGTGGT GTTGAGATTG AGACTGTGGC CGAAGAGACG CCAGAGCTTA TTCACAAGGC TATCATTGAT CCACTAGCAG GTCCTCAGCC TTATCAGGCA CGCGATCTTG GCTTCAAGTT AGGTCTAAAT CCTACACAGT TGAAGCAGTT CACTAAAGTC TTTATGGGCT TAGCGAAAAT GTTTGAAGAT CATGATTTCG CGCTACTTGA AATCAACCCG CTTGTTATCA CAGATGAAGG CAACATTCAC TGTCTCGATG GTAAGATTGG TATCGATGGT AATGCACTTT ATCGCCAGCC AAAGATCCGT GAAATGCACG ATCCATCACA AGATGATGCT CGTGAAGCCC ACGCTGCTAA GTTCGAACTT AACTATGTTG CACTAGACGG AAACGTTGGT TGCATGGTCA ACGGTGCTGG ACTTGCAATG GGTACGATGG ATATCGTTAA CCTACACGGT GGCAAGCCTG CTAACTTCCT TGATGTTGGC GGCGGAGCGA CTAAAGAGCG TGTTGCTGAA GCATTTAAGA TCATCTTATC AGATGACAAC GTTAAAGCCG TATTGGTTAA CATCTTCGGT GGAATCGTAC GTTGTGACAT GATTGCTGAA GGTATTATCG GTGCAGTAAA AGAGGTCGGT GTAACCGTTC CTGTTGTTGT ACGTCTTGAA GGTACTAACG CTGATCTTGG TCGTGAAGTT CTTGCTAACT CTGATCTTGA TATTATCGCT GCTACAAGTC TTACTGACGC GGCTGAGCAA GTTGTTAAAG CTGCGGAGGG CAAATAA
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Protein sequence | MNLHEYQAKS LFAEYGLPVS EGFACDTAQE AVEAAGHIGG DMWVVKCQVH AGGRGKAGGV KVTGDKNEIR AFAEHWLGKN LVTYQTDEKG QPVAKILVES CTDIANELYL GAVVDRASRR VVFMASTEGG VEIETVAEET PELIHKAIID PLAGPQPYQA RDLGFKLGLN PTQLKQFTKV FMGLAKMFED HDFALLEINP LVITDEGNIH CLDGKIGIDG NALYRQPKIR EMHDPSQDDA REAHAAKFEL NYVALDGNVG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVAE AFKIILSDDN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VTVPVVVRLE GTNADLGREV LANSDLDIIA ATSLTDAAEQ VVKAAEGK
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