Gene Swoo_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1839 
SymbolsucC 
ID6116102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2275262 
End bp2276428 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content45% 
IMG OID641633342 
Productsuccinyl-CoA synthetase subunit beta 
Protein accessionYP_001760218 
Protein GI170726192 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00631921 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.060899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTGC ATGAGTATCA GGCGAAATCT CTATTTGCCG AATATGGTTT ACCAGTGTCA 
GAAGGCTTTG CATGTGATAC AGCTCAAGAA GCAGTAGAAG CAGCAGGTCA TATTGGCGGT
GATATGTGGG TTGTTAAGTG TCAAGTACAC GCTGGCGGCC GTGGTAAAGC AGGTGGCGTA
AAAGTTACTG GCGATAAAAA CGAAATCAGA GCATTTGCTG AACATTGGTT AGGTAAGAAC
TTAGTGACTT ACCAAACAGA TGAGAAAGGT CAGCCTGTTG CTAAGATTTT AGTAGAAAGC
TGTACTGACA TCGCTAATGA ATTGTACCTA GGTGCAGTTG TTGACCGTGC TTCACGTCGC
GTTGTATTTA TGGCATCTAC TGAAGGTGGT GTTGAGATTG AGACTGTGGC CGAAGAGACG
CCAGAGCTTA TTCACAAGGC TATCATTGAT CCACTAGCAG GTCCTCAGCC TTATCAGGCA
CGCGATCTTG GCTTCAAGTT AGGTCTAAAT CCTACACAGT TGAAGCAGTT CACTAAAGTC
TTTATGGGCT TAGCGAAAAT GTTTGAAGAT CATGATTTCG CGCTACTTGA AATCAACCCG
CTTGTTATCA CAGATGAAGG CAACATTCAC TGTCTCGATG GTAAGATTGG TATCGATGGT
AATGCACTTT ATCGCCAGCC AAAGATCCGT GAAATGCACG ATCCATCACA AGATGATGCT
CGTGAAGCCC ACGCTGCTAA GTTCGAACTT AACTATGTTG CACTAGACGG AAACGTTGGT
TGCATGGTCA ACGGTGCTGG ACTTGCAATG GGTACGATGG ATATCGTTAA CCTACACGGT
GGCAAGCCTG CTAACTTCCT TGATGTTGGC GGCGGAGCGA CTAAAGAGCG TGTTGCTGAA
GCATTTAAGA TCATCTTATC AGATGACAAC GTTAAAGCCG TATTGGTTAA CATCTTCGGT
GGAATCGTAC GTTGTGACAT GATTGCTGAA GGTATTATCG GTGCAGTAAA AGAGGTCGGT
GTAACCGTTC CTGTTGTTGT ACGTCTTGAA GGTACTAACG CTGATCTTGG TCGTGAAGTT
CTTGCTAACT CTGATCTTGA TATTATCGCT GCTACAAGTC TTACTGACGC GGCTGAGCAA
GTTGTTAAAG CTGCGGAGGG CAAATAA
 
Protein sequence
MNLHEYQAKS LFAEYGLPVS EGFACDTAQE AVEAAGHIGG DMWVVKCQVH AGGRGKAGGV 
KVTGDKNEIR AFAEHWLGKN LVTYQTDEKG QPVAKILVES CTDIANELYL GAVVDRASRR
VVFMASTEGG VEIETVAEET PELIHKAIID PLAGPQPYQA RDLGFKLGLN PTQLKQFTKV
FMGLAKMFED HDFALLEINP LVITDEGNIH CLDGKIGIDG NALYRQPKIR EMHDPSQDDA
REAHAAKFEL NYVALDGNVG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVAE
AFKIILSDDN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VTVPVVVRLE GTNADLGREV
LANSDLDIIA ATSLTDAAEQ VVKAAEGK