| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1836 |
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| Symbol | sdhB |
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| ID | 6116099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2270179 |
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| End bp | 2270886 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633339 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_001760215 |
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| Protein GI | 170726189 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0319754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0434672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTTGA ATATCGCAAT TTATCGCTAT AATCCCGATG TAGACGCGAA GCCGTATATG
AAGGATTACA CGTTGGAAGT GGCTGAAGGG ACCGATATGA TGGTTCTCGA TGCACTGATG
CTTTTGAAAG AACAAGATCC AACGTTAGCA TTTCGTCGCT CATGCCGTGA AGGTGTTTGT
GGTAGTGACG GTCTAAATAT GAATGGTAAA AACGGCCTGG CATGTATCAC GCCTGTGTCG
ACATTCAAAG GTAAGAAGAT AGAGATCAGA CCACTGCCTG GCATGCCTGT TGTCCGCGAT
CTTATTGTGG ACTTATCTCA ATTCTACAAG CAGTATGAGA AGATAAAGCC GTATCTGATT
AATGATGAGA AAACGCCTGC GCGTGAACAT CTGCAATCAC CTGAAGAGCG TGCGCATCTT
GATGGTTTAT ATGAATGCAT CATGTGTGCT TGTTGTTCTA CTGCTTGTCC ATCATTCTGG
TGGAACCCAG ATAAGTTTAT CGGACCAAGT GGCTTACTTC ATGCCTATCG TTTCTTAATT
GATAGCCGTG ATACAGCCAC GGAAGAGCGT CTGTCTGAAC TTGATGATGC CTATAGCGTA
TTCCGTTGCC ATAGCATCAT GAACTGTGTG GATGTTTGTC CTAAAGGATT GAATCCAACT
AAAGCGATTG GACATATTAA GTCCATGTTG CTTAAGAGAG CAGTATAA
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| Protein sequence | MNLNIAIYRY NPDVDAKPYM KDYTLEVAEG TDMMVLDALM LLKEQDPTLA FRRSCREGVC
GSDGLNMNGK NGLACITPVS TFKGKKIEIR PLPGMPVVRD LIVDLSQFYK QYEKIKPYLI
NDEKTPAREH LQSPEERAHL DGLYECIMCA CCSTACPSFW WNPDKFIGPS GLLHAYRFLI
DSRDTATEER LSELDDAYSV FRCHSIMNCV DVCPKGLNPT KAIGHIKSML LKRAV
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