Gene Swoo_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1816 
Symbol 
ID6116079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2246220 
End bp2246720 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content43% 
IMG OID641633319 
Producthypothetical protein 
Protein accessionYP_001760195 
Protein GI170726169 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0359339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0830506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAGTG CGATTGTTGT TTTGGGAGCG CCAAATGATA GTGATGGCAA CTTGTCTGTG 
ATGGCACTCT CTCGATGCGA TCTCGCATAC ACCTATTTTT CTCAAAAAAA CCACCTCAAA
ATTATCTGCA CTGGTGGGGT TGGCGCTCAT TTCAATACCA CTTCAACTCC CCATGCACAG
TACTTGAAAA ATTATTTGAT GAGTAAAGGG GTACCACAGA TAAATTTTCT TCCCCTTGTC
GAGAGCCGAT TTACCTTTGA AGATGCACTA CTGGCTCGAG AGGTTATTGA AGAGCATAAA
ATTACCTCTC TAGTTATAGT GACATCAGAG TTTCATCTTC CCCGAGCCAA ATTAGTGTTT
AGCACGATTT TCCCACAAAT CACGTTCCAC TACTTGGCGG CAACGACGCC ACTTTCTGAT
GATGAACTGC TTAAACTTGA AAAGCATGAG AGGGATGTGA TGGAAAGGGA GAGGCGTAAT
CTGAGTACTT TGCTAAGGTA A
 
Protein sequence
MSSAIVVLGA PNDSDGNLSV MALSRCDLAY TYFSQKNHLK IICTGGVGAH FNTTSTPHAQ 
YLKNYLMSKG VPQINFLPLV ESRFTFEDAL LAREVIEEHK ITSLVIVTSE FHLPRAKLVF
STIFPQITFH YLAATTPLSD DELLKLEKHE RDVMERERRN LSTLLR