| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1814 |
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| Symbol | |
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| ID | 6116077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2244230 |
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| End bp | 2244940 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633317 |
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| Product | lipoprotein releasing system, ATP-binding protein |
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| Protein accession | YP_001760193 |
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| Protein GI | 170726167 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein
[TIGR02324] phosphonate C-P lyase system protein PhnL |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0451036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0825777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAGAGT TATTGTTAGA AGTGAAGAGT GTCAGTAAAC GTTTTCAAGA GGGGACGGTG
GATACTCAAG TGCTTACAAG TGTGGATCTA CAGGTATTTA AAGGTGAGCA ATTAGCCATT
ATCGGTACCT CAGGCTCAGG TAAAAGTACT TTATTGCATA TCATGGGGAC ACTCGATAAG
CCAAGCAGTG GCCATGTCTT TATGTTAGGG GAAGACCTAT ATGGTTTGTC GCCGCGTCGC
CAATCTGAGG TGAGAAATCA GGACTTAGGC TTTATCTATC AATTTCACCA TCTATTGCCA
GAGTTTAGTG CGCTTGAAAA TGTTGCCATG CCGGCCCTTA TTCAGGGAAG AAATCGTAAA
GAGGTTGAAG TTGAGGCTAA GGCATTATTG GAGCGAGTAG GTCTTGGGCA TAGATTTGAT
CATACCCCAG GTGAGATGTC AGGTGGAGAG CGTCAGCGTA CTGCGATAGC CAGAGCGTTA
ATTAATAAGC CTAAGCTAGT CTTAGCAGAT GAGCCAACGG GTAACTTAGA TGCTACGAGT
GGCGAGGCTG TGTATGAGCT GATCCGTGAG CTTGCAAACC AGTTAGGCAC GGCATTTGTG
GTTGTAACCC ATGACGCCAA ATTAGCAGCA AGAATGGACA GGCAGCTGAA GATGAAAGAT
GGCCACCTTC AGAGTGAACA GCTTACAGAT GTTGAAGGAA AGGCTTCATG A
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| Protein sequence | MPELLLEVKS VSKRFQEGTV DTQVLTSVDL QVFKGEQLAI IGTSGSGKST LLHIMGTLDK
PSSGHVFMLG EDLYGLSPRR QSEVRNQDLG FIYQFHHLLP EFSALENVAM PALIQGRNRK
EVEVEAKALL ERVGLGHRFD HTPGEMSGGE RQRTAIARAL INKPKLVLAD EPTGNLDATS
GEAVYELIRE LANQLGTAFV VVTHDAKLAA RMDRQLKMKD GHLQSEQLTD VEGKAS
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