Gene Swoo_1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1812 
Symbol 
ID6116075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2242219 
End bp2242812 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content45% 
IMG OID641633315 
Producthypothetical protein 
Protein accessionYP_001760191 
Protein GI170726165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.028303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0775956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCACTG ACTCAAGCCC CTATTTTAGT GTCAAGCACG ATTTTAAAGT CTACCTAACA 
GCTTGGCCAG ATAACGCCCC CATTCCAACT GAGGGTGAAT TAACGCTGAT GCTACCACTT
GGTCTGCAGC TTATTAGTGA TGTTAAATCT TTAGAAGCCG ACTGCTTATT GCAACTAAGG
CATTTAGATG ATGAAGCTAA AACCGTTGTT GAGTACCTTA AACTGCAGTC GAAGAAGGTC
GATCTGGTTC TGCAACATGT ACTCGAACGC GAAGCACATG ACGGGGAGCT ACATCAAGGA
AAGTTTTTTG GCGGGAGTGG GATCCGCATA ATCGGGGCAA CACAATTTGA TGTCGGGAAG
CAGTTTAAGC TGACGCTTCA TATTAAAGAG GAGCTGGTTG CCCTGCTCTG TTTTGCTCAA
GTCACGGCTA CTCAAGTGAT AGAAGCTACG GATGTCGAAC CGCAAACAGG TTATTTGACT
GAGTTAGAGT TCTCTGTGAT CACAGACACT GACGTAGAGC AGCTGGTCAA GGCGAGCTTG
AGCGTACAAC AAAGGCAATT AAAACAACGC AAGCTTGCGA AAAAAGCGAC ATAA
 
Protein sequence
MITDSSPYFS VKHDFKVYLT AWPDNAPIPT EGELTLMLPL GLQLISDVKS LEADCLLQLR 
HLDDEAKTVV EYLKLQSKKV DLVLQHVLER EAHDGELHQG KFFGGSGIRI IGATQFDVGK
QFKLTLHIKE ELVALLCFAQ VTATQVIEAT DVEPQTGYLT ELEFSVITDT DVEQLVKASL
SVQQRQLKQR KLAKKAT