| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1807 |
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| Symbol | |
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| ID | 6116070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2235310 |
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| End bp | 2236323 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633310 |
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| Product | beta-hexosaminidase |
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| Protein accession | YP_001760186 |
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| Protein GI | 170726160 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0532513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0404034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTACT TAATGCTTGA TCTGCTTTCT ACCCAAGCTT CTGCAGAGGA GCTTACTCAG
CTGAAACACC CTATGGTTGG AGGGGTGATC TTATTCAGTA GAAATTATAC TGATCGTCCG
CAACTTGTCT CATTAGTAGA GTCGCTCCGT GTTGTTAGGC CAGATCTTCT TATTGCAGTC
GATCATGAGG GGGGAAGAGT ACAGCGCTTT AGGGATGGTT TTACCCATAT ACCGGCTATG
GGAGACATTC TTCCATTTGC TGGCGGCGAT ATGATACTTG CTAAAAAATG GGCTGTAGAG
TTAGGTTTTC TTATGGCTGT GGAGCTTTTG GCTTGTGATA TTGATTTGAG CTTCGCACCT
GTGCTTGATC TTAATCGTGT CAGTGAGGTG ATAGGTAAGC GTGCATTTAG CTCTGAACCC
AATGAAGTCA TTGAGCTTGC TGGAAGCTTT ATAGAGGGGA TGCATCAAGC TGGTATGGCA
TCTGTTGGTA AACACTTTCC AGGACATGGC AGTGTGGTTG CTGATTCTCA TATTGCTCAG
CCTTATGATG AGCGTAGTAA AGAGGAGATC CTTGAGCTAG ATATGCAACC TTTTAAATCG
CTGATAGCCA AAGATCAGCT CCACGGTGTG ATGCCCGCAC ATGTGATCTA TTCAAAGGTT
GATCCAAATC CTGCTGGTTT TTCATCATTT TGGCTGCAAG ATATATTACG TGAACAGTTA
AGTTTTCGGG GAGTGATATT CTCTGATGAT CTAGGGATGA AGGGGGCGGG AGTTGTGGGC
GGGTATAAAG CCAGAGCTCA AGCCGCATTA GATGCAGGTT GTAATATGAT TTTGATATGC
AATGATGCCA AGGGAGCTAC AGAGGTACTT GAAGAGTTAG TTTGGCCGAC CAGTCAGCCT
GAATATCCAG CTCAGTTATT GAAGCCTGAT AGTAAAATCG TTGCACAAGC TCTTCAAAAC
GATGAAAGGT GGCAGCAAGC CAAACTCCTT GCATCAAGAT TTTCAACAGA TTAA
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| Protein sequence | MSYLMLDLLS TQASAEELTQ LKHPMVGGVI LFSRNYTDRP QLVSLVESLR VVRPDLLIAV
DHEGGRVQRF RDGFTHIPAM GDILPFAGGD MILAKKWAVE LGFLMAVELL ACDIDLSFAP
VLDLNRVSEV IGKRAFSSEP NEVIELAGSF IEGMHQAGMA SVGKHFPGHG SVVADSHIAQ
PYDERSKEEI LELDMQPFKS LIAKDQLHGV MPAHVIYSKV DPNPAGFSSF WLQDILREQL
SFRGVIFSDD LGMKGAGVVG GYKARAQAAL DAGCNMILIC NDAKGATEVL EELVWPTSQP
EYPAQLLKPD SKIVAQALQN DERWQQAKLL ASRFSTD
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