Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1806 |
Symbol | |
ID | 6116069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2233611 |
End bp | 2234987 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641633309 |
Product | L-serine dehydratase 1 |
Protein accession | YP_001760185 |
Protein GI | 170726159 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0700873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0255188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAGTG TATTTGACAT GTTCAAAATA GGAATTGGTC CCTCTAGTTC ACATACTGTA GGCCCGATGA AAGCTGGAAA CATCTTCATA GAGGATCTCC AGAAAGCAGG CCTATTGGAT ACAACTGATG AGTTGCGTTC AGAGCTGTTT GGATCGCTCG GTCAAACGGG TAAAGGTCAC GGTACAGGTA AAGCCGTGAT ACTAGGCTTA ATGGGAGAAG CACCAGATAC CGTAGATACT GACGCAATTG ATGGGATCTT AAATGAGGTC AGTCAAAGTG AAGTCCTATT GATGGCCAAC GGCACAAAAG TCACCTTTAC TCGTGAATTA GGGATAACCT ACCATAGACG AAAAAGCCTC CCAGCCCACG CCAATGCGAT GACGCTTTAT GCATACCGCC AAGGTCAATG CATATTCGAG CGAACTTATT ACTCCGTTGG TGGTGGCTTT ATCTTAGATC AAGATGAGAT TTTAGCCCAA GATGCATCCC CCGCCGCACC GATAAAATCT GCCCCCTATG ATTTTAACAG TGCAACTCAG CTCCTCACTC TCTGCACAGA TAATGGGTTA AGTATCTCAT CGCTGATGAT GGAGAACGAA CTGAGCATAG CCTCTGAGGC TGAGATAAAG CAGCAGTTAT GGATTATCTG GCAAACCATG AAAAACTGTG TCGAGCGCGG ATATAAGAAA GAGGGGATCC TCCCAGGAGG CTTAAAACTA AGACGCCGTG CCCCTGCTAT GTACCGCCGT TTAAAAGCTG AAGGTAAAAA CAGCGTCGAT CCGCTAACGG CATTGGATTG GGTAGATCTG TTCGCGCTAT CGGTGAATGA GCAAAATGCA GCAGGTGATC GCGTAGTCAC CGCACCAACC AACGGGGCCG CAGGCATCAT TCCTGCCGTA CTTTGCTACT ATGATATGTT TGTTCAGGAA GTGGATCTTG AAGTCTGTTG TCGTTACCTG TTAACCGCTG CCGCTATCGG TATCCTTTAT AAGAAGAATG CATCTATATC CGGTGCAGAA GTCGGTTGCC AAGGTGAAGT TGGCGTAGCT TGCTCTATGG CTGCAGGAGC CCTAACAGAG ATCATGGGCG GTACCATTGA GCATGTTGAA AATGCAGCTG AGATTGGCAT GGAGCATAAC TTAGGCTTAA CCTGCGACCC TGTTGGCGGT CTAGTACAGG TTCCCTGCAT AGAGCGTAAT GCTATGGGCG CCGTCAAGGC CATTAACGCT TCCAGAATGG CACTGCACGG AGATGGAAAC CACAAAGTAT CCCTAGATAA AGTGATCAAA ACCATGATGG ATACAGGCAA GGATATGCGC AGCAAGTATA AAGAAACCGC TAAAGGTGGT TTGGCCGTTA ATATCGTAGA GTGTTAA
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Protein sequence | MISVFDMFKI GIGPSSSHTV GPMKAGNIFI EDLQKAGLLD TTDELRSELF GSLGQTGKGH GTGKAVILGL MGEAPDTVDT DAIDGILNEV SQSEVLLMAN GTKVTFTREL GITYHRRKSL PAHANAMTLY AYRQGQCIFE RTYYSVGGGF ILDQDEILAQ DASPAAPIKS APYDFNSATQ LLTLCTDNGL SISSLMMENE LSIASEAEIK QQLWIIWQTM KNCVERGYKK EGILPGGLKL RRRAPAMYRR LKAEGKNSVD PLTALDWVDL FALSVNEQNA AGDRVVTAPT NGAAGIIPAV LCYYDMFVQE VDLEVCCRYL LTAAAIGILY KKNASISGAE VGCQGEVGVA CSMAAGALTE IMGGTIEHVE NAAEIGMEHN LGLTCDPVGG LVQVPCIERN AMGAVKAINA SRMALHGDGN HKVSLDKVIK TMMDTGKDMR SKYKETAKGG LAVNIVEC
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