Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1805 |
Symbol | cysB |
ID | 6116068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2232568 |
End bp | 2233542 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641633308 |
Product | transcriptional regulator CysB |
Protein accession | YP_001760184 |
Protein GI | 170726158 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.110232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0101242 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTAC AGCAACTCAG ATATATTGCC GAAGTGGTTA ATCATAACCT CAATGTGTCG GCAACAGCTG AAAACCTTTA TACATCGCAA CCAGGGATCA GCAAACAAGT TAGAATGCTT GAAGATGAGC TAGGTATCCA GATTTTTGGT CGTAGTGGTA AGCATTTAAC TCATGTGACA CCTGCCGGTG AGCAGGTAAT AAGTATTGCA AATAACATCC TTGGCAAAGT TGAAAGCATT AAAAAGGTGG CTGAAGAGTA CACTAAGCCT GATCAAGGTG AGTTAAATAT TGCAACGACA GACACCCAAG CTAGATACGC ATTGCCAAAC ATCATTCGTG GTTTTATTGA GCGTTACCCT AAAGTCAACC TTCATATGCA CCAAGGCACA CCTTCTCAAA TTAGTGAGCT TGCTGCACGT GGAGATGCCG ATTTTGCCAT TGCAACTGAG GGGATGCACC TGTACTCAGA TCTGATCATG CTGCCTTGTT ATCACTGGAA TCGTTCAATC GTGGTTAAAC GGGATCATCC TTTGGCCTCA CGCAGCAATA TCAGTATTGA AGATCTAGGT CGTTTTCCAC TTGTGACTTA TGTGTTTGGT TTCGACCGCG AATCTGAGAT TGAGAAATCT TTTAATAGTG CAGGGTTGGA GCCAAGAGTG GTGTTTAGTG CCACTAGTGC AGATGTACTA AAAACCTATG TTCGTTTAGG GCTAGGTGTG GGGGTTATCG CTTCTATGGC GATCGATCCA GTGATGGATA GAGATCTTGT AGCAATCGAT GCGAGTCACC TGTTTGGCCA TAGCACGACG AAAATTGGTT TCAGAAAAGG AAACTTCTTA AGAACTTACA TGTATGAGTT TATTGAACAC TTTGCTCCCC ATCTCACAAA AGAGGTGGTC GAGAAAGCGG TAGGTTTAAG AGACCCACAA TTGATTGAAA ATATGTTCGC CAATATAGAG TTGCCAGTAC GTTAA
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Protein sequence | MKLQQLRYIA EVVNHNLNVS ATAENLYTSQ PGISKQVRML EDELGIQIFG RSGKHLTHVT PAGEQVISIA NNILGKVESI KKVAEEYTKP DQGELNIATT DTQARYALPN IIRGFIERYP KVNLHMHQGT PSQISELAAR GDADFAIATE GMHLYSDLIM LPCYHWNRSI VVKRDHPLAS RSNISIEDLG RFPLVTYVFG FDRESEIEKS FNSAGLEPRV VFSATSADVL KTYVRLGLGV GVIASMAIDP VMDRDLVAID ASHLFGHSTT KIGFRKGNFL RTYMYEFIEH FAPHLTKEVV EKAVGLRDPQ LIENMFANIE LPVR
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