| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1800 |
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| Symbol | |
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| ID | 6116063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2222761 |
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| End bp | 2224071 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633303 |
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| Product | sodium:dicarboxylate symporter |
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| Protein accession | YP_001760179 |
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| Protein GI | 170726153 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0926897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000253529 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCATTAA CTCAATCAAA GAAACTCGGC CTCACGAGTA AAATACTTAT CGGTATGGGA
GCCGGTATAA TATTAGGGTT ACTTTTAAGG AATTTATTTC CCGATAGCAG TTTTATCAAT
GAATATATTA CTGAGGGCTT TTTACACGTA ATTGGTACTG TTTTCGTTTC TGGTCTCAAA
ATGCTAGTCG TCCCTCTGGT TTTCATCTCT TTGGTTTGTG GAACTTGCTC ACTGAGCGAT
CCATCTAAAC TTGGGCGCTT AGGCGGAAAA ACCATCGCCT TTTATCTCTT CACTACCGCA
ATTGCCATCT CTGTTGCGAT CTCCATTGCG ATACTCGTCC ATCCAGGTAA TGCCTCCTTG
GTGAGTGAAG GACTAAGCTT TAACGCAAAA GAAGCACCAA GCTTGTCTGA AGTGTTAATC
AATATTGTCC CAACTAACCC TCTGCAAGCG ATGAGTGAAG GCAATATGCT TCAAATCATC
CTATTTGCCG TTATTTTCGG TTTTGCAATA TCACATATTG GCGAGCGAGG AAAACGCGTT
GCAGCGCTTT TTAACGACCT TAATGAAGTG ATAATGCGCG TCGTCACACT CATCATGCAA
CTAGCACCTT ATGGTGTATT CGCTTTGATG GCGAAACTGG CTTTAACGCT CGGTCTGGAA
ACCTTCGGCA GTGTGGTGAA GTACTTCTTC GTTGTGCTAG GTGTGTTACT TATCCACGGA
TTTATCGTTT ACCCCTCTCT TCTCAAACTA TTTACCGGAC TTAACCCACT TATCTTTATC
CGTAAGATGC GTGATGTGCA GCTTTTTGCA TTCAGCACGG CGAGTTCCAA TGCAACCTTG
CCTGTGACTA TCGAGGCCGC TGAACACAGA TTAGGTGTCG ATAACAAAGT CGCCTCCTTC
ACACTGCCTT TAGGTGCGAC AATTAACATG GATGGTACCG CCATCATGCA AGGTGTTGCC
ACGGTATTTA TTGCGCAAGT TTATGGTGTA GATCTGACCA TCACCGACTA TACAATGGTC
GTTGTTACCG CCACTTTAGC CTCAATAGGC ACCGCAGGTG TGCCAGGTGT CGGACTTATC
ATGCTAGCCA TGGTATTAAA TCAGGTTGGG CTCCCTGTTG AAGGTATTGC ACTGATTATC
GGTGTCGACA GACTACTAGA CATGGTCAGA ACTGCGGTCA ATGTAACTGG AGATAGTGTG
GCAACTGTGA TTATCGCAAA GTCTGAAAAT GAGTTTGATG AAACAACATT TAATGATACT
CAGGCGGGGA AAACTGCAGG TAGCTTTAAC GAGCAACTGC ACGCTAAATA G
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| Protein sequence | MSLTQSKKLG LTSKILIGMG AGIILGLLLR NLFPDSSFIN EYITEGFLHV IGTVFVSGLK
MLVVPLVFIS LVCGTCSLSD PSKLGRLGGK TIAFYLFTTA IAISVAISIA ILVHPGNASL
VSEGLSFNAK EAPSLSEVLI NIVPTNPLQA MSEGNMLQII LFAVIFGFAI SHIGERGKRV
AALFNDLNEV IMRVVTLIMQ LAPYGVFALM AKLALTLGLE TFGSVVKYFF VVLGVLLIHG
FIVYPSLLKL FTGLNPLIFI RKMRDVQLFA FSTASSNATL PVTIEAAEHR LGVDNKVASF
TLPLGATINM DGTAIMQGVA TVFIAQVYGV DLTITDYTMV VVTATLASIG TAGVPGVGLI
MLAMVLNQVG LPVEGIALII GVDRLLDMVR TAVNVTGDSV ATVIIAKSEN EFDETTFNDT
QAGKTAGSFN EQLHAK
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