| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1799 |
|---|
| Symbol | |
|---|
| ID | 6116062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 2221385 |
|---|
| End bp | 2222689 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641633302 |
|---|
| Product | inosine kinase |
|---|
| Protein accession | YP_001760178 |
|---|
| Protein GI | 170726152 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00398478 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000265344 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTC CAGGTCAACG AAAGTCAAAG CATTACTTTC CCGTACAGAA TCGTGACCCA
CTGTTGGCGC AACTGACGCA GCAGCCGGAG CGATTTCCAA CGTACATTAC CGGCATAGAT
CAAACTCTGG TTGATATTGA AGCTAAGGTT GCTGACGAAC TGCTACAGCG CTATGAATTA
CCGAAAGGAA ATTCGACCTT AATTGATGAT GAAACAGCTC ATGCTCTCTA TACGGAACTG
AAGAGCCAAG CGTTAATCAG TGATGAGTTT GCTGGTGGGA CTATTGGTAA CACTGTTCAC
AATTACTCTA TTCTTGCCGA TGATAGATCT GTCTTGTTTG GTGTGATGAG CAAGAATATC
GAAGTGGGTA GCTACGCATA CCGATACCTT TGTAATACCT CCTCTAAAGT CGACCTTAAC
TATCTACAGC CTGTAGAGGG GCCTATTGGG CGCTGCTTTA CACTTATCTC TGAATGTGGT
GAGCGTACCT TTGCAATTAG TAAAGGTTCG ATGGATAAGC TAAGTCCTGA GTTTATCAAC
AAAGAGGTGA TTCAAGGTGC ATCTGCTTTA GTCTTAACTG CATATTTGAT GCGAGCTAGT
GATGGTGATC AAATTACTCA AGCTGCGTTA AAAGCGATTG AGTATGCTAA AGAAGCGGAT
GTTCCTGTGG TTCTTACATT AGGTACCCGG TTCTTGATTG AGAGCGATCC TCAATGGTGG
AAAACGTTTA TCGAAGAGAA TGTGACAATT CTGGCGATGA ATGAAGATGA AGGTGAAGCC
TTAACTGGGT TTAAAGATCC GCTTCAGGCA AGTGAAGCTG CGCTTGAGTT GTGCGATCTC
GTGTTAACGA CAGCGGGTCC TCTTGGTCTA TATATGGCGG GTTACACGGA TGACTCTGAG
AAGCGTGAAA CCTCTCATAC GCTGTTACCT GGTATTATCC CAGAGTTTAA CCGTTATGAG
TTTTCTCGTC CAAAGCTAAA GTCGGATTGT AATACACCAA TTAAAGTATA CGCACATATC
TCACCATACA TGGGAGGCCC TGAAAAGATC CGTAACACTA ATGGTGCTGG TGATGGCGCA
TTAGCGGCTC TGTTACATGA CTTAGCGTCT AACACTTTTC ATAAGGCGAA TGTTCCTGGT
TCAAGTAAAC ATAAGCGTGA CGGGCTATGT TACTCCTCAT TCTCGCAGGT GTGTAAATAT
GCTAACCGCG TGGCTTATGA AGTACTTGCT CAACACAGTC CACGACTATC AAGTGGTCTA
CCTGAACGAG AAGACAGTTT AGAAGAGGCA TACTGGGAAA GATAA
|
|---|
| Protein sequence | MKFPGQRKSK HYFPVQNRDP LLAQLTQQPE RFPTYITGID QTLVDIEAKV ADELLQRYEL
PKGNSTLIDD ETAHALYTEL KSQALISDEF AGGTIGNTVH NYSILADDRS VLFGVMSKNI
EVGSYAYRYL CNTSSKVDLN YLQPVEGPIG RCFTLISECG ERTFAISKGS MDKLSPEFIN
KEVIQGASAL VLTAYLMRAS DGDQITQAAL KAIEYAKEAD VPVVLTLGTR FLIESDPQWW
KTFIEENVTI LAMNEDEGEA LTGFKDPLQA SEAALELCDL VLTTAGPLGL YMAGYTDDSE
KRETSHTLLP GIIPEFNRYE FSRPKLKSDC NTPIKVYAHI SPYMGGPEKI RNTNGAGDGA
LAALLHDLAS NTFHKANVPG SSKHKRDGLC YSSFSQVCKY ANRVAYEVLA QHSPRLSSGL
PEREDSLEEA YWER
|
|---|
| |