Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1793 |
Symbol | |
ID | 6116056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2213404 |
End bp | 2216139 |
Gene Length | 2736 bp |
Protein Length | 911 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641633296 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_001760172 |
Protein GI | 170726146 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00315607 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000397841 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTTATC AGGTGTTGGC CAGAAAATGG CGCCCTGCCA CTTTTGAGCA AATGGTTGGC CAGTCTCATG TTTTGCATGC GTTAACCAAC GCACTAACTC AGCAGAGATT ACATCATGCA TATCTGTTTT CTGGTACACG AGGGGTGGGG AAAACAAGTT TAGCCCGACT CTTCGCAAAA GGATTAAATT GTGAACAAGG TGTCACGGCA ACCCCGTGTG GACAATGTTC CAGTTGTGTT GAGATCTCTG AAGGTCGCTT CGTGGATCTT ATTGAGGTGG ATGCGGCTTC AAGAACAAAA GTCGATGACA CGCGTGAGTT ACTTGATAAT GTCCAGTACC GTCCCAGTCG AGGCCGGTTT AAAGTCTATT TGATCGATGA AGTGCATATG CTGTCCCGCA GTAGCTTTAA TGCGCTCCTT AAAACATTGG AAGAGCCACC TGAGCATGTA AAGTTTTTGC TAGCAACAAC GGATCCCCAG CGTCTTCCTG TGACAGTTCT TTCGCGTTGT TTACAGTTTA ATTTAAAAAG TTTGACCCAA GATGAGATCA TTCAACAGTT ATCCCATGTG TTGACTCAAG AGTCGCTTGT CTTTGAAAAT CAAGCATTAA CATTATTAGC CAAAGCGGCT AATGGCAGCA TGCGAGATGC ATTGAGCTTG ACTGACCAAG CGATCGCTTT TGGTGGCGGG GAAGTTAGAC TTAAGCAAGT GCAGACTATG CTAGGTAGCA TTGATGAAAG GCATGTTATC ACGCTTTTTA ACGCCATAAC TCAGGGAGAT ATTGAGCACC TTATGCAGGT GATCTCCCAA GTGCTCTCAT TTGGTGCTGA TCCTGAAGAG GTGCTGCGTA GCTTACTTGA ACTGTTACAT CAGATAACCT TAAGTCAATT TGCCCCCGCT GCGGCTCAGC TATCCATCTA TAGTGAGCAG ATTAGCGCAT TTGCAATACA GTTAAGCCCA GAACAGGTGC AACTCTATTA CCAGTTACTG TTAACAGGCC GGAAAGATCT TCCCCATGCA CCTGATCCTA AATCGGGTCT GGAGATGGCA CTACTCAGAG CGGTGTCATT TGTGCCAGAG GTACCTGTTA AGCGTTGGAT TGTCGATAAG CCTGCCACTA TTTCAGTGCC TGATGTTAAT GATGCTAAGC CAAGCGCTCA TGCTGTTGAG GCTACTCAAA TTTCCACGCC TTTAACTACA AATGCAGCGA TACCACCTGC AGAGTCTCTT GATGGAATAG GTGATATTGA GTCTCCTGAG CTCAAGCTAC AAAAGGAGAG CGAGCCTGCA ACTGAGTTTG GTAGTACATC TGATAGTGCA GATCATAGTG CTAAGGAAAA CGTACCCGTT TTAGCTTCCG CCTCCGATGA ACCTGAAGAG TCAGATGATC AAGATGCTGA TCTTGAGAGC TTAAACAGTG AACAAACCTT GATATTAAGT CAGGCAGCAA GTCAGGGAAT GGAGCAAGAG AGTACAGACT CCACTGAGTT ACAAGCATCT GTTGATGTAA AAGAAGCTGA AGTTGTCCCC GAGTCAACTC AATCGCAGTC TGAGGTTATC CCTGAGCGAA CAGAGAGTGC TGTTGAAATA AGCAGTGAGT CATCTGACTC AGATCCTAAT GTGGTTCCCG ATGAGTACTA TGCTCAAGCG GCTCAGTTCG ATGCTCAAAA TGAGTATCAA GAGCAGTTTC ATGAGGATTA TTCAGACCCC TATTCAGAAG ACACTGCCGA GCAAGGTGCA TACTCAACGC CAGAGCCAAG TGCTGAGAGT CATGAATCCC GTTCAGCTGA GATTTCAGCT GCTGATGGTC CAGAGGAAGA TGATATTCTG GATGCTGTTT TAGCGGCGAG AGATAGTTTG TTGACTCAAC TTAGTGCTGA TAAGCCTAAG GAGAGTGATG GAAAAAAGTC TGATCCCCAG CGAAAAGAGT TTGTTCCGCC TAAGCGACAA GCACCGGTAG CAGAGCCTCA AGAGCCAATT CAAAGCGAAG ATAATCAAAC TGCTCATCAA GCAGAGCACC AAGCTGATAA AAGTGATGGT GATGAAACTG GTGAGAATGA AGTTGATGTT AACGTCGCTG ATAACGAGGA TAGGCCACCT TGGGAGGAGC CATTAACTCC TTCTGTTGAA GAGACGTTAA GCGATGCAAC GCCTAACGTA GAAGACCTAG AGAGTGAATC AACTCAAGCT TCTGAGCTTG AGGAATCTGT TTCTGAGCCA GAAGATAAGA TGCTGGCAGC TGAGATTAGC TTAGCTGATG ATGGCAGTGT GAGCGGCAAT GAGGTCGATC TTAAATGGTA TCGTTTGATG TCGGCACTGG ATGTGGGGGG ACGAGTACGC CAACTGGCGG TTAACTCTGT TTGCCACCAT TTCATTGAAC CTCTTGCGCT CTTATTAAAA CCTAATCAGA AGCATCTTGC TGCTGATATT GCGATAACCC AATTAGAGGA AGCGCTGGGA AGAGCCTTAG ATAAAGAGGT TAATATTGCG GTTTCTGTGG GAAGTGACAC CACCCGTGAA ACGCCCTTAG AGATACGTCA GCGTTTCCAT AGAGAGTTAC TGTCTCAGGC GCACCAAGGA TTAATGAGTG ATACTCATAT TCAATGGTTG ATGGCTGAGA TGGATGCTGA GTTTGAAACG GATAGCTTAA GCTACAGTCC AGAATTGCTC AGTTTGAAAG GAAATACCAT CGAGCTTATC GATAAGTCGA ACTTTAAGTC GCTACCTGAG TCATAA
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Protein sequence | MSYQVLARKW RPATFEQMVG QSHVLHALTN ALTQQRLHHA YLFSGTRGVG KTSLARLFAK GLNCEQGVTA TPCGQCSSCV EISEGRFVDL IEVDAASRTK VDDTRELLDN VQYRPSRGRF KVYLIDEVHM LSRSSFNALL KTLEEPPEHV KFLLATTDPQ RLPVTVLSRC LQFNLKSLTQ DEIIQQLSHV LTQESLVFEN QALTLLAKAA NGSMRDALSL TDQAIAFGGG EVRLKQVQTM LGSIDERHVI TLFNAITQGD IEHLMQVISQ VLSFGADPEE VLRSLLELLH QITLSQFAPA AAQLSIYSEQ ISAFAIQLSP EQVQLYYQLL LTGRKDLPHA PDPKSGLEMA LLRAVSFVPE VPVKRWIVDK PATISVPDVN DAKPSAHAVE ATQISTPLTT NAAIPPAESL DGIGDIESPE LKLQKESEPA TEFGSTSDSA DHSAKENVPV LASASDEPEE SDDQDADLES LNSEQTLILS QAASQGMEQE STDSTELQAS VDVKEAEVVP ESTQSQSEVI PERTESAVEI SSESSDSDPN VVPDEYYAQA AQFDAQNEYQ EQFHEDYSDP YSEDTAEQGA YSTPEPSAES HESRSAEISA ADGPEEDDIL DAVLAARDSL LTQLSADKPK ESDGKKSDPQ RKEFVPPKRQ APVAEPQEPI QSEDNQTAHQ AEHQADKSDG DETGENEVDV NVADNEDRPP WEEPLTPSVE ETLSDATPNV EDLESESTQA SELEESVSEP EDKMLAAEIS LADDGSVSGN EVDLKWYRLM SALDVGGRVR QLAVNSVCHH FIEPLALLLK PNQKHLAADI AITQLEEALG RALDKEVNIA VSVGSDTTRE TPLEIRQRFH RELLSQAHQG LMSDTHIQWL MAEMDAEFET DSLSYSPELL SLKGNTIELI DKSNFKSLPE S
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