Gene Swoo_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1781 
Symbol 
ID6116044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2203072 
End bp2203410 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content43% 
IMG OID641633284 
Productferredoxin, 2Fe-2S type, ISC system 
Protein accessionYP_001760160 
Protein GI170726134 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID[TIGR02007] ferredoxin, 2Fe-2S type, ISC system 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.695057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000073514 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCACAAA TAGTATTTCT ACCCCATGAA GAGTTATGTC CCGACGGTGC AGTGGTTGAA 
GCGGCTGAAG GTGAAACAGT ATTAGATGTT GCTTTGCGTA ATGGCATTCA TATTGAGCAT
GCTTGTGAGA AATCCTGTGC ATGTACAACA TGTCATGTGA TCATAAGAGA AGGCTTCGAT
GAGCTTGAAG AGAGTGATGA ACTTGAAGAT GATATGCTAG ACAAGGCGTG GGGTTTAGAG
CCGGAAAGTA GACTTTCATG TCAATCAAAA GTGCCCAGTA CCGATCTTGT GGTTGATATT
CCTAAATACA CCATCAATAT GGTGAGTGAA GGCCACTAG
 
Protein sequence
MPQIVFLPHE ELCPDGAVVE AAEGETVLDV ALRNGIHIEH ACEKSCACTT CHVIIREGFD 
ELEESDELED DMLDKAWGLE PESRLSCQSK VPSTDLVVDI PKYTINMVSE GH