| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1780 |
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| Symbol | hscA |
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| ID | 6116043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2201186 |
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| End bp | 2203048 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633283 |
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| Product | chaperone protein HscA |
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| Protein accession | YP_001760159 |
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| Protein GI | 170726133 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | [TIGR01991] Fe-S protein assembly chaperone HscA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000166205 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCCTAT TGCAGATCGC TGAGCCCGGA CAGAGTGCCG CTCCCCATCA ACATCGTCTG
GCGGTTGGTA TTGATTTAGG TACCACAAAC TCGTTAGTTG CGGCTGTTCG CAGTGGCGTC
GCAAACACGC TGCCAGATGA CAAGTCTCAT CACTCATTGC CTTCGGTGGT CCGATACACT
CAAGAGGGTG TTGAGGTTGG AGTGGATGCA GAAGCTAACT CAGCGAAAGA TCCACAAAAT
ACCATTATTT CAGTTAAGCG TTTTATGGGA CGCAGTTTGA GTGATATTCG CTCTGGGGTA
CAAGATTTAC CCTATCAACT CGAAACCAGT GAAAACGGTC TACCTGTGTT CGTAACGGAG
CAGGGCAAAG TTAACCCGAT ACAGGTTTCT GCTGAAATTT TAAAACCTTT AGTTTCACGT
GCTGAAAAAA CCTTAGGTGG CGAGTTAGAA GGTGTTGTTA TTACGGTTCC TGCATATTTC
GATGATGCAC AGCGCCAAGG TACTAAAGAT GCTGCAGGCT TACTTGGTGT AAAAGTGCTG
AGATTGCTTA ATGAGCCTAC CGCAGCGGCA ATCGCTTATG GACTTGATTC TGGACAAGAG
GGCGTTATTG CCATCTATGA TCTTGGTGGC GGAACTTTTG ATATCTCTAT ATTGCGTTTG
CATAAAGGGG TGTTTGAAGT ATTAGCCACT GGCGGTGATT CCGCTTTAGG TGGTGATGAT
TTTGATCATC TTCTATACCA ACATCTTTTG AATCAATGGC AGCTAGCGTC ACCTTCTGCA
ACCTTAAGTC GTCGCCTTCT GATTGAGTCT CGACGGGTGA AGGAGGCACT TACTGATAAT
ATTCAAGTAA CAGCCTCTAT TAAACTCGAT GATGGAACTG AGCTCACTCA TGATGTGGCT
AAAGCTACAT TTGATGATTT GATCAGTAGC TTAGTTAAGA AAACGGTTAG CAGCTGCCGT
CGAGCCTTGC GTGATGCTGG TGTCACTAAT GATGAAGTAT TAGAAACAGT AATGGTGGGG
GGGTCAACCC GCGTACCACT TGTGCGCGAG CTGGTGGATA AGTTTTTTGG TAAAGAGCCA
TTAACCTCCA TTGACCCTGA CAGAGTCGTC GCCATTGGCG CAGCGATTCA AGCTGATATT
TTAGTCGGCA ATAAGCCTGA GTCAGACCTT CTGCTTCTCG ATGTGCTTCC TTTATCATTG
GGTATAGAGA CCATGGGCGG GTTAGTCGAG AAGATTGTGT CACGCAATAC GACTATTCCT
GTTGCTAAGG CTCAGGAGTT CACCACATTT AAAGATGGCC AAACAGCAAT GGCATTCCAT
GTGGTTCAAG GAGAGCGAGA GCTGGTTGAC GATTGCCGCT CTTTGGCAAG ATTTACACTT
AAGGGGATCC CGCCTTTAGC TGCTGGTGCT GCACATATAC GTGTGACCTT TCAGGTTGAC
GCAGATGGAT TATTAAGTGT CACTGCTATG GAGAAATCGA CGGGAGTACA GTCTAGCATT
CAAGTTAAGC CTTCTTTTGG ATTAACTGAT GAAGAGATTG GTACCATGCT CAAAGACTCT
ATGGCGAATG CCAAAGAAGA TATCACTAGG CGCATGTTGG CAGAACAAAA AGTGGAAGCT
GCAAGAGTAT TAGAGACCTT ATCAGCTGCT TTGCAAAAAG ATGCGGTACT TTTGACAGAG
AGTGAGCGCA GCGATATTGA GCAAGCTATG GCAAGCTTAG CGCAGATCAG CAGCCAAGAT
GATGCTGACG CAATAGAGAA AGCGATCGAA GCTTTAGATG CTAGTACGCA AGATTTTGCG
GCTAAGCGTA TGGATAATTC AATCAAGTTG GCACTGAAGG GCCAATCAGT TGATAGTATT
TAA
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| Protein sequence | MALLQIAEPG QSAAPHQHRL AVGIDLGTTN SLVAAVRSGV ANTLPDDKSH HSLPSVVRYT
QEGVEVGVDA EANSAKDPQN TIISVKRFMG RSLSDIRSGV QDLPYQLETS ENGLPVFVTE
QGKVNPIQVS AEILKPLVSR AEKTLGGELE GVVITVPAYF DDAQRQGTKD AAGLLGVKVL
RLLNEPTAAA IAYGLDSGQE GVIAIYDLGG GTFDISILRL HKGVFEVLAT GGDSALGGDD
FDHLLYQHLL NQWQLASPSA TLSRRLLIES RRVKEALTDN IQVTASIKLD DGTELTHDVA
KATFDDLISS LVKKTVSSCR RALRDAGVTN DEVLETVMVG GSTRVPLVRE LVDKFFGKEP
LTSIDPDRVV AIGAAIQADI LVGNKPESDL LLLDVLPLSL GIETMGGLVE KIVSRNTTIP
VAKAQEFTTF KDGQTAMAFH VVQGERELVD DCRSLARFTL KGIPPLAAGA AHIRVTFQVD
ADGLLSVTAM EKSTGVQSSI QVKPSFGLTD EEIGTMLKDS MANAKEDITR RMLAEQKVEA
ARVLETLSAA LQKDAVLLTE SERSDIEQAM ASLAQISSQD DADAIEKAIE ALDASTQDFA
AKRMDNSIKL ALKGQSVDSI
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