Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1777 |
Symbol | |
ID | 6116040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2199850 |
End bp | 2200233 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641633280 |
Product | scaffold protein |
Protein accession | YP_001760156 |
Protein GI | 170726130 |
COG category | [C] Energy production and conversion |
COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
TIGRFAM ID | [TIGR01999] FeS cluster assembly scaffold IscU |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000033 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTTATA GCGAAAAAGT ACTCGATCAC TATGAGAATC CACGTAACGT AGGTTCTTTC GATAAAAATG ATCCGTCAGT TGTGACAGGT ATGGTGGGTG CACCAGCTTG TGGTGACGTA ATGAAGCTTC AACTTAGAAT TGATGCTGAT GGCGTGATTG AAGATGCCAA GTTCAAAACT TACGGTTGTG GCAGTGCGAT AGCCTCTAGC TCACTTGTGA CCGAGTGGGT TAAAGGTAAG ACGATTGAAG AAGCTGCTGC GATCAAAAAT ACTGATATTG CTGAAGAGCT TGCACTACCT CCTGTGAAGA TCCATTGCTC AATTTTGGCC GAAGATGCAA TTAAAGCGGC GATTGATGAT TATAAGTCAA AGCAAGATAA GTAA
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Protein sequence | MAYSEKVLDH YENPRNVGSF DKNDPSVVTG MVGAPACGDV MKLQLRIDAD GVIEDAKFKT YGCGSAIASS SLVTEWVKGK TIEEAAAIKN TDIAEELALP PVKIHCSILA EDAIKAAIDD YKSKQDK
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