Gene Swoo_1777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1777 
Symbol 
ID6116040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2199850 
End bp2200233 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content43% 
IMG OID641633280 
Productscaffold protein 
Protein accessionYP_001760156 
Protein GI170726130 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01999] FeS cluster assembly scaffold IscU 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000033 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTATA GCGAAAAAGT ACTCGATCAC TATGAGAATC CACGTAACGT AGGTTCTTTC 
GATAAAAATG ATCCGTCAGT TGTGACAGGT ATGGTGGGTG CACCAGCTTG TGGTGACGTA
ATGAAGCTTC AACTTAGAAT TGATGCTGAT GGCGTGATTG AAGATGCCAA GTTCAAAACT
TACGGTTGTG GCAGTGCGAT AGCCTCTAGC TCACTTGTGA CCGAGTGGGT TAAAGGTAAG
ACGATTGAAG AAGCTGCTGC GATCAAAAAT ACTGATATTG CTGAAGAGCT TGCACTACCT
CCTGTGAAGA TCCATTGCTC AATTTTGGCC GAAGATGCAA TTAAAGCGGC GATTGATGAT
TATAAGTCAA AGCAAGATAA GTAA
 
Protein sequence
MAYSEKVLDH YENPRNVGSF DKNDPSVVTG MVGAPACGDV MKLQLRIDAD GVIEDAKFKT 
YGCGSAIASS SLVTEWVKGK TIEEAAAIKN TDIAEELALP PVKIHCSILA EDAIKAAIDD
YKSKQDK