| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1773 |
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| Symbol | |
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| ID | 6116036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2196236 |
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| End bp | 2197000 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633276 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001760152 |
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| Protein GI | 170726126 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.12594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00165952 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTAAGCA ATATTCGCGT CGTTCTCGTT GGTACATCTC ATCCAGGCAA CATAGGTTCC
ACCGCTCGTG CAATGAAAAC CATGGGCCTC TCCACACTTT ATTTAGCTGA GCCAAGAGTA
GAGCCTGATG GTCACTCAGT GGCCTTGGCT GCTGGTGCAT CAGATATTCT TAAACATGCC
GTTACGGTTG ATAGTGTTGC CGAGGCGATA GCTGATTGCA GTTTAGTGAT AGCAACCAGC
GCAAGAAGTC GTACATTAGA CTGGCCAATG TTAGAGCCAA GAGAAGCGGG AGAAAAACTC
GTATCCTCTG CACTAACAGG TCCTGTTGCT ATCGTATTCG GGCGCGAAAA TAATGGCCTG
ACAAATGAAG AGTTACAGAA GTGTAACTAT CATGTCGCGA TTCCTGCCAA TCCTGAATAT
ACCTCATTAA ATCTAGCCCA AGCTGTGCAG ATCATCTGTT ATGAAGCACG TGTGGCTCAC
TTAGCTCAGG TGCAACGTGA TTTTGAAAAT GCCAAACCTG CCGATTATGT TGAGCCGGAA
AATGAGTATC CTTTTGCAAG TGAGCGTGAG AATTTTTTCA CTCACCTTGA AAAGACATTA
CTCAATACAG GCTTTATTGT TAAGCAGCAT CCAGGACAAG TGATGACTAA GCTGCGCCGC
CTTTTCAGTC GGGCAAGACT TGAAAAGCAA GAGATGAATA TTCTTCGTGG CATGCTGACT
TCCATCGATA AGAAAGTGGC GACAAAAGAT AAGAGCGAAA CATAA
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| Protein sequence | MLSNIRVVLV GTSHPGNIGS TARAMKTMGL STLYLAEPRV EPDGHSVALA AGASDILKHA
VTVDSVAEAI ADCSLVIATS ARSRTLDWPM LEPREAGEKL VSSALTGPVA IVFGRENNGL
TNEELQKCNY HVAIPANPEY TSLNLAQAVQ IICYEARVAH LAQVQRDFEN AKPADYVEPE
NEYPFASERE NFFTHLEKTL LNTGFIVKQH PGQVMTKLRR LFSRARLEKQ EMNILRGMLT
SIDKKVATKD KSET
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