Gene Swoo_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1772 
Symbol 
ID6116035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2195228 
End bp2196079 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content46% 
IMG OID641633275 
Productinositol-phosphate phosphatase 
Protein accessionYP_001760151 
Protein GI170726125 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.32038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00184964 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCCCCG ATTATTTATA TCTGTTCTTT AACATCCAGG GGATTGTAAT GCATCCGATG 
CAGACTATTG CTGTGCGCGC TGCCCGCGCT GCCGGCCAAA CGATTATACG TGCCTTCGCT
GAACTCGATA AGATCGAAGT AACAGCCAAA GGTATCAATG ACTACGTTAC AAACGTAGAC
AAAGAAGCTG AAGCTGCCAT TACTTATCAG ATCCGTAAAT CTTACCCTGA TCACACCATT
GTTGGTGAAG AGAATGGTGA GAACAAAGGC GAGAACAAAG AGTTCGTCTG GATTATTGAC
CCTCTGGATG GCACTAACAA CTTTGTTAGA GGCATTCCTC ACTTCGCAGT TTCTATCGCT
CTTCAACATA AGGGTAAGAC AGAAGTTGCC GTTGTATACG ATCCTATCCG TGATGAACTA
TTTACAGCGA CTCGTGGTAA AGGTGCAAAA TTTAACGATT TCCGTATGCG CGTTTCTAAG
CATAATGAGC TTAATGAAAC TATTATCGCT ACAGGCTTCC CATTTAAAGC TAAACAGCAC
ACCGAAACTT ACATGAAGAT CTTTGGTGAA CTATTCACCC AGTGTGCCGA CGTTCGTCGT
GCAGGCTCAG CCGCGCTTGA TCTTGCTTAT GTAGCTGCAG GTCGTGTTGA TGGTTTCTTC
GAAATTGGTC TTAAGCCTTG GGATATCGCA GCAGGCGACC TACTAGTGCG TGAAGCTGGC
GGTACCGTTA CCGATTTCAC TGGCAACCAT GAGTATATGA ATTCTGGCAA CATCATCGCT
GGTGCCCCTA AAGTAACCTC TGCCATTGTT AAAACCGCAC GCCCACTATT AAGTGAAGCG
CTTAAGCGTT AA
 
Protein sequence
MRPDYLYLFF NIQGIVMHPM QTIAVRAARA AGQTIIRAFA ELDKIEVTAK GINDYVTNVD 
KEAEAAITYQ IRKSYPDHTI VGEENGENKG ENKEFVWIID PLDGTNNFVR GIPHFAVSIA
LQHKGKTEVA VVYDPIRDEL FTATRGKGAK FNDFRMRVSK HNELNETIIA TGFPFKAKQH
TETYMKIFGE LFTQCADVRR AGSAALDLAY VAAGRVDGFF EIGLKPWDIA AGDLLVREAG
GTVTDFTGNH EYMNSGNIIA GAPKVTSAIV KTARPLLSEA LKR