| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1762 |
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| Symbol | |
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| ID | 6116025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2186961 |
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| End bp | 2187872 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633265 |
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| Product | siroheme synthase |
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| Protein accession | YP_001760141 |
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| Protein GI | 170726115 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.128247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.013009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGTATT TTCCTCTATT TGTTGATACC ACAAAACTGA ATGTTTTACT CATTGGCGCA
GGTGAAGTCG CGAGTCGTAA ACTTGAGCTG CTGGGGAGAA CAGAAGCGTG CATTAAGGTT
ATTGCTATCG AAACCTCTGA TGAGGTTCAG GGTTATGCCG ATAAAAAACG TATTACTCTT
ATCCAGCGAG CTGTGGTTGA GGAGGATATT GCCGATGTGG ATATTATCTA TTTAGCGACA
GCCAATGAGG CATTGAATGG TCACTTGGCT GATTTAGCTA CCGCTCGCGG GATCTGGGTT
AATGTCGTTG ATAGTCCTGA ACTCTGCCGC TTCATAACAC CATCAATTGT TGATAGAGGT
CGGTTACAAG TTGCGATAAG CACGGCTGGT GCAGCGCCTG TATTTGCTAG AGAGCTCCGT
TCTCGAATTG AGTCATGGTT ACCGCCCTCT CTTGCTGATC TATTTGATTT TGTGGCAGAG
CATCGTAAAG AGGTGCAGGA TAGGTTACCT GAGTTCAAGG CGCGTAAACT TTTTTGGGAG
CATTTCTTTC GCTCAAATGG CGATAGGTTT GATGATAAAA CTCTGCAGCG GTATGAGGAT
TCATTTCAGG GGCTGACTGC ACAGGGTGAG ATCCTATTAA TTGATGATTG TACGTCGATT
GTAATGCTTC CTATCTCTGC AATGCCGTTA ATGCAAAGGT TAGATCATAT CTTTAGCGAT
ATTGAATTGC CTTTTACGCT GAATGAACTG GTTAGGCGAG ATGCGACTAG AGAAAACTTG
GTGGCTATTA GCGAGTTAAC CCATCGGCTG GAGAAGGGAA AACGTAGTCT TGTCTTTGCT
GATAGAGATA AGATCTCACA ACTCAAAGCA CACTTCCCAA TGGCTAAGCA CCTGAAAGCG
GGCTCTCTTT AA
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| Protein sequence | MQYFPLFVDT TKLNVLLIGA GEVASRKLEL LGRTEACIKV IAIETSDEVQ GYADKKRITL
IQRAVVEEDI ADVDIIYLAT ANEALNGHLA DLATARGIWV NVVDSPELCR FITPSIVDRG
RLQVAISTAG AAPVFARELR SRIESWLPPS LADLFDFVAE HRKEVQDRLP EFKARKLFWE
HFFRSNGDRF DDKTLQRYED SFQGLTAQGE ILLIDDCTSI VMLPISAMPL MQRLDHIFSD
IELPFTLNEL VRRDATRENL VAISELTHRL EKGKRSLVFA DRDKISQLKA HFPMAKHLKA
GSL
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