| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1757 |
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| Symbol | yajC |
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| ID | 6116020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2182576 |
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| End bp | 2182908 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633260 |
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| Product | preprotein translocase subunit YajC |
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| Protein accession | YP_001760136 |
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| Protein GI | 170726110 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1862] Preprotein translocase subunit YajC |
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| TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000115206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00353276 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTGATTT CAAATGCATA CGCTGCCGAT GCTCCTGTAT CTGGCGCAGG TGGTACCATG
GAACTTGTTT TCATGCTGGT TATATTCGGC CTGATCTTTT ATTTCATGAT TTTCCGTCCA
CAATCTAAGC GCGTTAAAGA GCATAAGAGC CTAATGAGCT CATTAGGTAA AGGGGATGAA
GTCCTGACCA GCGGTGGCAT ACTGGGTAAG ATCGCTAAAA TCAGCGATGA AAATGACTAC
GTGTTGTTGT CTCTGAACGA AACAACTGAA ATTACAATCA AGAAGGATTA CATTGCGGCT
GTATTGCCTA AAGGCTCTAT TAAGTCACTT TAA
|
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| Protein sequence | MLISNAYAAD APVSGAGGTM ELVFMLVIFG LIFYFMIFRP QSKRVKEHKS LMSSLGKGDE
VLTSGGILGK IAKISDENDY VLLSLNETTE ITIKKDYIAA VLPKGSIKSL
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