Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1755 |
Symbol | queA |
ID | 6116018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2180201 |
End bp | 2181238 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641633259 |
Product | S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
Protein accession | YP_001760135 |
Protein GI | 170726109 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000916492 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00504055 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGCGTTA CCGATTTTTC ATTTGAACTT CCCGATGAGC TTATTGCTCG TTATCCCATG CCTGAGCGCA CTTCATCTCG TCTACTCTCT TTAGAAGGTA ACAGTGGCAA GCTTGGTGAT AACCAGTTTA CCGATATTTT GGACATGGTT AATCCTGGCG ATTTAATGGT GTTTAATAAC ACCCGGGTGA TACCAGCACG ACTGTTTGGA CAAAAGGAGA CAGGCGGTAA GCTTGAGATC TTAGTTGAGC GTATGCTAGA CGATAAACGT ATTCTTGCCC ATGTCAGAAG CTCTAAATCT CCCAAAGTGA ACACTAAAGT GTGTCTCGAT GGTGGTTATG AGATGACCAT GCTTGCGCGT CATGATGCCC TGTTTGAACT AGAGCTTAAT GATGAGAAGA CCATTCTTGA GGTGCTTGAG AAAGTAGGTC ATATGCCTCT GCCTCCCTAT ATTGACCGTC CCGATGAAGA TGCGGATAAA GAACGCTACC AGACGGTTTA TAACGATGCG CCTGGCGCCG TTGCCGCGCC AACCGCGGGG CTACACTTCG ATGATGCACT GTTAAACAGA TTGAAAGAGA AGGGGGTTGA TACCGCCTTT GTGACGCTTC ATGTTGGCGC AGGGACTTTC CAACCTGTGA AAGTTGATGA TGTGCTTGAT CATAAGATGC ATTCAGAGTG GGCGGAAGTT TCTCAAGAAG TTGTCGATAA AATTGCGCAC ACTAAGGCTC ATGGTGGCCG AGTGATCGCG GTGGGGACGA CATCGGTTCG TTCACTAGAG AGCGCGGCGA AAGCAAGTGA GGATGAGCTT CAGCCTTTTT GCCGTGATAC TGATATTTTT ATCTATCCCG GTTATGAGTT TAAAGTGGTG GATGCCATGG TGACCAACTT CCATCTTCCT GAATCTACCT TGATCATGCT TTTGAGTGCT TTTGCTGGCT TCGATGAGGT AAAAAACGCC TATCAACACG CGATTGCTCA AAAATACCGC TTCTTTAGCT ATGGTGATGC CATGTTTGTG ACTAAAAAAG CGAACTAA
|
Protein sequence | MRVTDFSFEL PDELIARYPM PERTSSRLLS LEGNSGKLGD NQFTDILDMV NPGDLMVFNN TRVIPARLFG QKETGGKLEI LVERMLDDKR ILAHVRSSKS PKVNTKVCLD GGYEMTMLAR HDALFELELN DEKTILEVLE KVGHMPLPPY IDRPDEDADK ERYQTVYNDA PGAVAAPTAG LHFDDALLNR LKEKGVDTAF VTLHVGAGTF QPVKVDDVLD HKMHSEWAEV SQEVVDKIAH TKAHGGRVIA VGTTSVRSLE SAAKASEDEL QPFCRDTDIF IYPGYEFKVV DAMVTNFHLP ESTLIMLLSA FAGFDEVKNA YQHAIAQKYR FFSYGDAMFV TKKAN
|
| |