Gene Swoo_1755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1755 
SymbolqueA 
ID6116018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2180201 
End bp2181238 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content46% 
IMG OID641633259 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_001760135 
Protein GI170726109 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000916492 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00504055 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGTTA CCGATTTTTC ATTTGAACTT CCCGATGAGC TTATTGCTCG TTATCCCATG 
CCTGAGCGCA CTTCATCTCG TCTACTCTCT TTAGAAGGTA ACAGTGGCAA GCTTGGTGAT
AACCAGTTTA CCGATATTTT GGACATGGTT AATCCTGGCG ATTTAATGGT GTTTAATAAC
ACCCGGGTGA TACCAGCACG ACTGTTTGGA CAAAAGGAGA CAGGCGGTAA GCTTGAGATC
TTAGTTGAGC GTATGCTAGA CGATAAACGT ATTCTTGCCC ATGTCAGAAG CTCTAAATCT
CCCAAAGTGA ACACTAAAGT GTGTCTCGAT GGTGGTTATG AGATGACCAT GCTTGCGCGT
CATGATGCCC TGTTTGAACT AGAGCTTAAT GATGAGAAGA CCATTCTTGA GGTGCTTGAG
AAAGTAGGTC ATATGCCTCT GCCTCCCTAT ATTGACCGTC CCGATGAAGA TGCGGATAAA
GAACGCTACC AGACGGTTTA TAACGATGCG CCTGGCGCCG TTGCCGCGCC AACCGCGGGG
CTACACTTCG ATGATGCACT GTTAAACAGA TTGAAAGAGA AGGGGGTTGA TACCGCCTTT
GTGACGCTTC ATGTTGGCGC AGGGACTTTC CAACCTGTGA AAGTTGATGA TGTGCTTGAT
CATAAGATGC ATTCAGAGTG GGCGGAAGTT TCTCAAGAAG TTGTCGATAA AATTGCGCAC
ACTAAGGCTC ATGGTGGCCG AGTGATCGCG GTGGGGACGA CATCGGTTCG TTCACTAGAG
AGCGCGGCGA AAGCAAGTGA GGATGAGCTT CAGCCTTTTT GCCGTGATAC TGATATTTTT
ATCTATCCCG GTTATGAGTT TAAAGTGGTG GATGCCATGG TGACCAACTT CCATCTTCCT
GAATCTACCT TGATCATGCT TTTGAGTGCT TTTGCTGGCT TCGATGAGGT AAAAAACGCC
TATCAACACG CGATTGCTCA AAAATACCGC TTCTTTAGCT ATGGTGATGC CATGTTTGTG
ACTAAAAAAG CGAACTAA
 
Protein sequence
MRVTDFSFEL PDELIARYPM PERTSSRLLS LEGNSGKLGD NQFTDILDMV NPGDLMVFNN 
TRVIPARLFG QKETGGKLEI LVERMLDDKR ILAHVRSSKS PKVNTKVCLD GGYEMTMLAR
HDALFELELN DEKTILEVLE KVGHMPLPPY IDRPDEDADK ERYQTVYNDA PGAVAAPTAG
LHFDDALLNR LKEKGVDTAF VTLHVGAGTF QPVKVDDVLD HKMHSEWAEV SQEVVDKIAH
TKAHGGRVIA VGTTSVRSLE SAAKASEDEL QPFCRDTDIF IYPGYEFKVV DAMVTNFHLP
ESTLIMLLSA FAGFDEVKNA YQHAIAQKYR FFSYGDAMFV TKKAN