Gene Swoo_1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1753 
Symbol 
ID6116016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand- 
Start bp2178939 
End bp2179541 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content43% 
IMG OID641633257 
Producthypothetical protein 
Protein accessionYP_001760133 
Protein GI170726107 
COG category[S] Function unknown 
COG ID[COG3124] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00151115 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones7 
Fosmid unclonability p-value0.00163692 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTTTC TCGCACACCT TCATCTAGCC GATAACAGTA ATACCAGCCT TGCGGCTAAT 
TTAGCGGGAG ACTTCGCTAA AGGAAATATT GCTGACTTTC CTAAACATCT GCAGCAGGGG 
ATCTGGTTAC ACAGACAGAT AGATCAATTA ACCGATAGCC ATGAAATTAC CAAAGAGTTA 
CTGACCAAAT TTCCTGTCTC GCTTAGAAGA GCTGCACCGA TATTAATCGA CCTTGCCTTC 
GATCATATGT TAGCCAAGTA TTGGGATGAG TATCATAGTG CTAGCTTAAA AGCCTTCTCA 
ACTATTGCAT ATGATGCGAT AGATGCCTGT GAGCAACTGC CCGAGCGCTT ACAACTCATC 
GCACCTAAAA TCCGCAGCGA AAACTGGCTA TTAGCCTATA GAGATCGCAA AGGATTAAAT 
AAAGCCATCG AATCGATGGC AAGACGGGTA TCAAAACCTG AAATATTTAA CGGGGCCACT 
AAGGCCGTTA GCGACTTAGA TATTGAAATA GAGATAGCCT TTAGAACCTT TTATCCTCAG 
CTCATGGCTT ACAGCCGGAT CTGGACAAGA AAAACACCGA GTGAATACCT ACACCTCGAT 
TAA
 
Protein sequence
MNFLAHLHLA DNSNTSLAAN LAGDFAKGNI ADFPKHLQQG IWLHRQIDQL TDSHEITKEL 
LTKFPVSLRR AAPILIDLAF DHMLAKYWDE YHSASLKAFS TIAYDAIDAC EQLPERLQLI 
APKIRSENWL LAYRDRKGLN KAIESMARRV SKPEIFNGAT KAVSDLDIEI EIAFRTFYPQ 
LMAYSRIWTR KTPSEYLHLD