| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1743 |
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| Symbol | |
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| ID | 6116006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2167032 |
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| End bp | 2168537 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633247 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001760123 |
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| Protein GI | 170726097 |
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| COG category | [F] Nucleotide transport and metabolism
[L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.32779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGTTCTG AAGCCGAGGG AGTATTGACG AATGAGTCTT GTCGAAGAGC AAGGTTGGCG
AGAGATCCTC GTTTTGATGG TGTTTTTTTT ATTGGCGTAC TAACGACAGG GATCTTTTGC
CGCTCAATTT GCCCGGCAAC ACCGCCAAAG GAGAAGAATG TTCGCTACTT TTCTACGGCC
ATAGAGGCTG CCAATGCAGG GCTTAGGCCT TGTTTACGTT GCAGGCCTGA CAGTGCACCA
GGCTCCTTTG CATGGAAAGG CACTGATACG ACGGTTGAAC GTGCTTTATC ATTAATCGAT
GACGGCTTTC TTTTTGGTGA TAGCCCTGGT TCATTAGAAT CATTGGCGCA GAAGCTAGGG
ATCACCAGCC GATACTTAAG AAAACTCTTT GCCGACAAGG TGGGGACATC TCCAAACAAA
TATGCACAGT TTCGCCAATT GATGTTTGCT AAACAACTGT TACATCAGAC AGATCTGTCG
ATGACACAAG TTGGACTGGC AGCTGGATTT ACTAGTATCA GACGCTTTAA TGAAGTTTTT
CAGCAAACAT TAGCTTTAAC CCCTTCCGCC CTGCGTAAAA GCCGCGGCTC GCGCCAAAGC
GAATTGAGCC ATGAAGGGAG TGAAATACGA TTATCTATGC AGTTCTCCTA TCGACCACCG
CTTAATTGGC AAAAGCAGCT GGATTTTTAT CGGTTAAGAA TGGTCGAAGG GATGGAGTGG
GAAGCTGACT TAGAAGGCTA CAGTCGCAGC TTTCAACTTG GAGATGTGAA AGGTTTTTTT
GAGGCTAAGC ATGATGAAGT GAAGCATAGA TTTAATGTCA TTATTCATCT AGTCGATCCC
CAAGCTTTAC CGGTATTGAG TGAGGTGGTC GCGCAAATAA AGCGAGTATT GGATCTCGAC
GCTGATATGT TTCAAATCCA AACGAGTCTC TCTTCGATTG GAATTATTAA AAACTCGATT
GTAGATGGCC TAAGGTTGCC TGGTACCTGG TCTGCATTTG AAGCCGGCTG TAGGGCGATT
CTGGGTCAGC AGGTGAGTGT GGTTCAGGCC ACTAAATTGC TAAATCGATT AGTAGAGGCA
AACGGCGAGC GGCTTACTAT TTCAGGAAGA GAGATTCTTC TATTTCCAAC TCCTCTAGCA
ATAGCGAACG CAAGTTTAGA TGAGTTAAAA ATGCCGGGCG CCAGAAAAGC AGCCCTTAAT
GCTTTTGGGA CGTTTGTTAG TCAACACCCT GACGCACCTG TGGATGACTG GCTTAATATC
AAAGGAATAG GACCATGGAC AGTGGCCTAT GCGAAAATGA GAGGTCTAAG CGATCCTAAT
ATTTTACTCT GTTCAGATCT TATCGTTAAG AAAAGGGTGC TTAAGCGATA TGAGGCGTTG
CAGAGCTCTG AGACAGATTT AAAGGCAAAT CTAGATATTT CTTACAAAAC GATCACGCAG
CAATTAGAGC AAAGTATCTC TCCTTGGGGG AGTTACTTAA CTTTTCAATT ATGGAATTTA
GAATAA
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| Protein sequence | MCSEAEGVLT NESCRRARLA RDPRFDGVFF IGVLTTGIFC RSICPATPPK EKNVRYFSTA
IEAANAGLRP CLRCRPDSAP GSFAWKGTDT TVERALSLID DGFLFGDSPG SLESLAQKLG
ITSRYLRKLF ADKVGTSPNK YAQFRQLMFA KQLLHQTDLS MTQVGLAAGF TSIRRFNEVF
QQTLALTPSA LRKSRGSRQS ELSHEGSEIR LSMQFSYRPP LNWQKQLDFY RLRMVEGMEW
EADLEGYSRS FQLGDVKGFF EAKHDEVKHR FNVIIHLVDP QALPVLSEVV AQIKRVLDLD
ADMFQIQTSL SSIGIIKNSI VDGLRLPGTW SAFEAGCRAI LGQQVSVVQA TKLLNRLVEA
NGERLTISGR EILLFPTPLA IANASLDELK MPGARKAALN AFGTFVSQHP DAPVDDWLNI
KGIGPWTVAY AKMRGLSDPN ILLCSDLIVK KRVLKRYEAL QSSETDLKAN LDISYKTITQ
QLEQSISPWG SYLTFQLWNL E
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