| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1742 |
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| Symbol | |
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| ID | 6116005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2165017 |
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| End bp | 2166846 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633246 |
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| Product | ABC transporter related |
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| Protein accession | YP_001760122 |
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| Protein GI | 170726096 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.394506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAC GATTTGAATC ATGGATTGAT GCCCTGCCCG CCAAAGAGGC TGAACAACCA
CCAACAGGGA TATATGCTTT TTGCCGCTTT TACACGAAAG GGTTTGAGCT TCCACTTATT
TTAATGTCGA TATTAACGGC AATATTGGCG GTACTTGAGG TCTCTCTATT TGGGTTTATG
GGGCAACTTG TTGACCTGTT AATTGCTCAC GACCCCGACA CTCTATTTGA AAAAGAGGGT
AAAAAACTGC TCGGTATGAC ACTGCTAATA TTAGTTGTCA TTCCAGCACT CGTATTACTT
CATGCACTGA TTGTGTATCA AGGTTTGCTA GGCAACTATC CAATGTCTAT CAGGTGGTTA
GCTCATAGAT ACTTGCTCAA ACAGAGTGTC TCTTTTTATC AAAATGATTT TGCCGGACGT
ATCGCAACTA AGGTAATGCA GACCTCAATT GCGGTGCGAG ATACTGTAAC CAAAATCTTA
GATGTGCTGG TCTATATCTT AGTCTACTTC ATCTCAATGC TTGTCATGAT TGCAAATGCA
GATCCCCGCC TGATGGCACC TATGTTTATC TGGCTATGTG TCTATATTGG AATACAATTT
CTTTTCATTC CTAAGCTTAA AGCCGCCTCA ACAGCCCAAG CTGATGCACG TTCTACCATG
ACAGGAAGAG TCGTTGACAG CTATACCAAC ATTGCTACCG TCAAACTCTT TGCTCATACC
CAAAAAGAGG CTGAATATGC GCAAGGAAGT ATGGAAAGCT TTCTTCATAC CGTCTACCGC
CAGATGCGAT TAGTAACGGG CATTAATGTC AGCGTGCAGA TCATCAACTA CCTGCTTGTT
TTTGCGATCG CAGCAATATC AATATACCTA TGGAGCCACC ACGCTATAAC AATTGGCGCC
ATCACCATAG CGGTCAGTCT TTCACTCAGA CTTAATGGCA TGTCTCAATG GATCATGTGG
GAGATAAGCT CACTGTTTGA AAATATTGGT ACTGTCGCTG ATGGGGTCAA TACATTATCA
AAACCCACAG AGATCCAAGA TATAGAAAAT GCCGAGAAGC TTAAGGTATC ACATGGGGCT
ATCGACTTTA GACAGATAAG TTTTCACTAC GGCGAAGATA GCGGCGTCAT CGAAAAACTG
GATCTCAACA TTAAACCTGG AGAAAAAGTA GGTTTAGTTG GCCGCTCTGG CGCAGGGAAA
TCAACCTTAG TGAACCTGCT AATGCGCTTT TATGATGTAG AAAAAGGGAC AATTGAGATT
GATGGGCAAG ACATTAAGCA GGTACAACAA GACTCACTGC GTGCCAATAT AGGTATGGTA
ACTCAGGATA CCTCCCTACT TCACCGCTCA ATTCGTGACA ATATTCTCTA TGGAAATCCA
GAGGCTAGCG ATGAGGCTCT ACAAAGTGCC ATCACAAACT CTCAATCATA TGACTTTATC
CAATCACTAA GCGATCCTGA AGGAAACCAA GGACTCGATG CGCAGGTGGG TGAACGAGGC
GTTAAGCTCT CTGGCGGACA GCGCCAGCGT ATTGCAATTG CACGGGTTCT TTTAAAGAAT
GCCCCTATTT TGTTACTCGA TGAAGCCACA TCAGCGCTGG ATTCTGAAGT CGAAGCCGCC
ATTCAGGAAA GTTTATACAA ACTAATGGAG GGAAAAACAG TAATAGCCAT AGCACATAGG
CTTTCTACTA TCGCAGCGAT GGATAGGTTA ATCGTGTTGG ATCAAGGAAA TATCGTTGAA
CAAGGTACCC ACTTAGAGTT AATTGCCTCA GGTGGGATCT ATGCTCAGCT TTGGGCTCAT
CAAACTGGTG GTTTCCTAGG TATAGATTAA
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| Protein sequence | MFKRFESWID ALPAKEAEQP PTGIYAFCRF YTKGFELPLI LMSILTAILA VLEVSLFGFM
GQLVDLLIAH DPDTLFEKEG KKLLGMTLLI LVVIPALVLL HALIVYQGLL GNYPMSIRWL
AHRYLLKQSV SFYQNDFAGR IATKVMQTSI AVRDTVTKIL DVLVYILVYF ISMLVMIANA
DPRLMAPMFI WLCVYIGIQF LFIPKLKAAS TAQADARSTM TGRVVDSYTN IATVKLFAHT
QKEAEYAQGS MESFLHTVYR QMRLVTGINV SVQIINYLLV FAIAAISIYL WSHHAITIGA
ITIAVSLSLR LNGMSQWIMW EISSLFENIG TVADGVNTLS KPTEIQDIEN AEKLKVSHGA
IDFRQISFHY GEDSGVIEKL DLNIKPGEKV GLVGRSGAGK STLVNLLMRF YDVEKGTIEI
DGQDIKQVQQ DSLRANIGMV TQDTSLLHRS IRDNILYGNP EASDEALQSA ITNSQSYDFI
QSLSDPEGNQ GLDAQVGERG VKLSGGQRQR IAIARVLLKN APILLLDEAT SALDSEVEAA
IQESLYKLME GKTVIAIAHR LSTIAAMDRL IVLDQGNIVE QGTHLELIAS GGIYAQLWAH
QTGGFLGID
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